Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 IGKV2-23-201ENST00000518729 323 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 AL512347.1-201ENST00000566420 503 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 MTCYBP28-201ENST00000566728 1132 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 AC121247.2-201ENST00000604776 136 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 AC068722.2-201ENST00000618734 544 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 AP000676.3-201ENST00000623299 569 ntBASIC4.17□□□□□ -1.74
DDX4Q9NQI0 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
DDX4Q9NQI0 AL645937.1-201ENST00000641739 1652 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 AP000526.1-201ENST00000603308 1388 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
DDX4Q9NQI0 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
DDX4Q9NQI0 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
DDX4Q9NQI0 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
DDX4Q9NQI0 RNA5SP42-201ENST00000364278 115 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 RNU6-356P-201ENST00000384140 107 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 HSPE1P8-201ENST00000406997 288 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 AC009518.2-201ENST00000418056 731 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.16□□□□□ -1.74
DDX4Q9NQI0 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.16□□□□□ -1.74
DDX4Q9NQI0 RPL21P109-201ENST00000422213 475 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
DDX4Q9NQI0 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.16□□□□□ -1.74
DDX4Q9NQI0 AL390023.1-201ENST00000428836 262 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.16□□□□□ -1.74
DDX4Q9NQI0 AL353748.1-201ENST00000440753 474 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 RPL23AP16-201ENST00000441715 421 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 KATNBL1P3-201ENST00000443475 909 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.16□□□□□ -1.74
DDX4Q9NQI0 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.16□□□□□ -1.74
DDX4Q9NQI0 BTF3P5-201ENST00000457252 467 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 AC010468.1-201ENST00000461022 817 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.16□□□□□ -1.74
DDX4Q9NQI0 AC084357.1-201ENST00000473404 255 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 BZW1P2-201ENST00000473537 826 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 RPS26P15-201ENST00000488067 348 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 AC147055.4-201ENST00000504399 745 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 RNU6-232P-201ENST00000517144 64 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.16□□□□□ -1.74
DDX4Q9NQI0 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.16□□□□□ -1.74
DDX4Q9NQI0 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.16□□□□□ -1.74
DDX4Q9NQI0 LSM6P2-201ENST00000552208 177 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 AC067852.3-201ENST00000589177 561 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
DDX4Q9NQI0 AF131215.7-201ENST00000602443 707 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 Z94722.1-201ENST00000604328 474 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 YPEL5P2-201ENST00000605553 359 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 MIR7112-201ENST00000616126 65 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 AC138649.5-201ENST00000637456 137 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
DDX4Q9NQI0 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
DDX4Q9NQI0 NMD3P1-201ENST00000439704 1488 ntBASIC4.16□□□□□ -1.74
DDX4Q9NQI0 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
DDX4Q9NQI0 AC117529.2-201ENST00000512159 2068 ntBASIC4.15□□□□□ -1.74
DDX4Q9NQI0 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
DDX4Q9NQI0 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
DDX4Q9NQI0 AC008725.1-201ENST00000605123 2263 ntBASIC4.15□□□□□ -1.74
DDX4Q9NQI0 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.74
DDX4Q9NQI0 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.15□□□□□ -1.74
DDX4Q9NQI0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 SNORA4.1-201ENST00000364263 144 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 RNU6-1200P-201ENST00000384162 107 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 RNU6-253P-201ENST00000384730 105 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 ZNF603P-201ENST00000405613 487 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 AC073264.1-201ENST00000411508 416 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX4Q9NQI0 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.15□□□□□ -1.75
DDX4Q9NQI0 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms