Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 U3.15-201ENST00000365398 212 ntBASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 DUTP5-201ENST00000406790 469 ntBASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 RPS3AP24-201ENST00000407896 734 ntBASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 RNU2-43P-201ENST00000410306 190 ntBASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 AC009237.5-201ENST00000414271 501 ntBASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 AC138393.2-201ENST00000414742 246 ntBASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 MTCO3P12-201ENST00000416718 547 ntBASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 COX6CP13-201ENST00000428703 226 ntBASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 AL772161.1-201ENST00000439130 476 ntBASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 Z80107.2-201ENST00000445127 392 ntBASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 AL389915.2-201ENST00000454576 441 ntBASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 RNU7-63P-201ENST00000459054 62 ntBASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 AC091180.1-201ENST00000462104 372 ntBASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 AC022795.1-201ENST00000473808 480 ntBASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 AC123904.3-201ENST00000547218 814 ntBASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 AC006116.3-201ENST00000592968 361 ntBASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 NRBF2P5-201ENST00000603087 788 ntBASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 AL049539.1-201ENST00000611964 459 ntBASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 AL450472.3-201ENST00000615578 367 ntBASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 AC092794.2-201ENST00000620933 563 ntBASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 AL353748.2-201ENST00000622148 471 ntBASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TRIM55Q9BYV6 CKAP2P1-201ENST00000555477 2049 ntBASIC5.09□□□□□ -1.6
TRIM55Q9BYV6 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.09□□□□□ -1.6
TRIM55Q9BYV6 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.6
TRIM55Q9BYV6 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
TRIM55Q9BYV6 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.09□□□□□ -1.6
TRIM55Q9BYV6 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
TRIM55Q9BYV6 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
TRIM55Q9BYV6 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
TRIM55Q9BYV6 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
TRIM55Q9BYV6 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
TRIM55Q9BYV6 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.6
TRIM55Q9BYV6 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 OR52B1P-201ENST00000316506 909 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 RNA5SP305-201ENST00000362665 119 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 RNY3P3-201ENST00000363816 102 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 SNORA69-201ENST00000383895 132 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 SNORD3H-201ENST00000384486 214 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 RNU6-606P-201ENST00000384721 111 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 RNU6-876P-201ENST00000391295 104 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 AL109941.1-201ENST00000401925 229 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 AL591416.1-201ENST00000404015 867 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 RPL21P24-201ENST00000413752 448 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 SDCBPP3-201ENST00000419629 891 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 SNRPEP10-201ENST00000420249 274 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 AC244098.2-201ENST00000422068 99 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 AC114755.5-201ENST00000447760 831 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 AC073850.1-201ENST00000449243 255 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 SNRPCP2-201ENST00000504370 475 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 GAPDHP56-201ENST00000506031 988 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 RN7SKP66-201ENST00000516681 231 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 HMGB1P40-201ENST00000525121 540 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 OR5D15P-201ENST00000531671 942 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 RPL10P14-201ENST00000565265 298 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 AL357078.3-201ENST00000607528 618 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 AC100827.5-201ENST00000615883 426 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 AC074029.4-201ENST00000624796 1859 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 LINC01109-201ENST00000603837 3081 ntBASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 A2MP1-204ENST00000566278 4130 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms