Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC008716.1-201ENST00000511084 513 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 AC113155.1-201ENST00000511141 769 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC6.37□□□□□ -1.39
PHOX2BQ99453 HIGD1AP3-201ENST00000515857 278 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 RNU6-840P-201ENST00000517275 65 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 SNRPGP16-201ENST00000533275 226 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 RPL10P14-201ENST00000565265 298 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 BDH2P1-201ENST00000602288 736 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 AL450472.3-201ENST00000615578 367 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 MIR6085-201ENST00000618314 110 ntBASIC6.37□□□□□ -1.39
PHOX2BQ99453 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PHOX2BQ99453 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
PHOX2BQ99453 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC6.37□□□□□ -1.39
PHOX2BQ99453 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PHOX2BQ99453 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PHOX2BQ99453 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
PHOX2BQ99453 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
PHOX2BQ99453 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PHOX2BQ99453 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.36□□□□□ -1.39
PHOX2BQ99453 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
PHOX2BQ99453 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
PHOX2BQ99453 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
PHOX2BQ99453 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PHOX2BQ99453 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.36□□□□□ -1.39
PHOX2BQ99453 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PHOX2BQ99453 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
PHOX2BQ99453 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.36□□□□□ -1.39
PHOX2BQ99453 AL033543.1-201ENST00000623440 13454 ntBASIC6.36□□□□□ -1.39
PHOX2BQ99453 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
PHOX2BQ99453 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.36□□□□□ -1.39
PHOX2BQ99453 SNORD81.1-201ENST00000363064 77 ntBASIC6.36□□□□□ -1.39
PHOX2BQ99453 U8.8-201ENST00000365399 135 ntBASIC6.36□□□□□ -1.39
PHOX2BQ99453 MIR135A2-201ENST00000384854 100 ntBASIC6.36□□□□□ -1.39
PHOX2BQ99453 MRPL35P1-201ENST00000404272 572 ntBASIC6.36□□□□□ -1.39
PHOX2BQ99453 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.36□□□□□ -1.39
PHOX2BQ99453 AC090774.1-201ENST00000435925 246 ntBASIC6.36□□□□□ -1.39
PHOX2BQ99453 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.36□□□□□ -1.39
PHOX2BQ99453 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.36□□□□□ -1.39
PHOX2BQ99453 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC6.36□□□□□ -1.39
PHOX2BQ99453 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PHOX2BQ99453 AC092647.2-201ENST00000452998 253 ntBASIC6.36□□□□□ -1.39
PHOX2BQ99453 AC005532.2-201ENST00000467154 373 ntBASIC6.36□□□□□ -1.39
PHOX2BQ99453 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC6.36□□□□□ -1.39
PHOX2BQ99453 MTND3P25-201ENST00000509243 135 ntBASIC6.36□□□□□ -1.39
PHOX2BQ99453 RNU6-914P-201ENST00000516749 109 ntBASIC6.36□□□□□ -1.39
PHOX2BQ99453 IGKV2-23-201ENST00000518729 323 ntBASIC6.36□□□□□ -1.39
PHOX2BQ99453 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.36□□□□□ -1.39
PHOX2BQ99453 RN7SL652P-201ENST00000577769 300 ntBASIC6.36□□□□□ -1.39
PHOX2BQ99453 MIR5701-3-201ENST00000578890 82 ntBASIC6.36□□□□□ -1.39
PHOX2BQ99453 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.36□□□□□ -1.39
PHOX2BQ99453 MIR5701-1-201ENST00000585138 82 ntBASIC6.36□□□□□ -1.39
PHOX2BQ99453 AC067852.5-201ENST00000589299 310 ntBASIC6.36□□□□□ -1.39
PHOX2BQ99453 FO393422.1-201ENST00000603908 708 ntBASIC6.36□□□□□ -1.39
PHOX2BQ99453 MIR5701-2-201ENST00000615634 82 ntBASIC6.36□□□□□ -1.39
PHOX2BQ99453 AP001282.2-201ENST00000616149 309 ntBASIC6.36□□□□□ -1.39
PHOX2BQ99453 SNORD39.4-201ENST00000620099 78 ntBASIC6.36□□□□□ -1.39
PHOX2BQ99453 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PHOX2BQ99453 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PHOX2BQ99453 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PHOX2BQ99453 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.36□□□□□ -1.39
PHOX2BQ99453 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PHOX2BQ99453 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
PHOX2BQ99453 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PHOX2BQ99453 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.36□□□□□ -1.39
PHOX2BQ99453 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PHOX2BQ99453 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
PHOX2BQ99453 PRO1804-201ENST00000623780 2050 ntBASIC6.35□□□□□ -1.39
PHOX2BQ99453 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
PHOX2BQ99453 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PHOX2BQ99453 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
PHOX2BQ99453 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PHOX2BQ99453 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PHOX2BQ99453 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
PHOX2BQ99453 Y_RNA.324-201ENST00000365165 102 ntBASIC6.35□□□□□ -1.39
PHOX2BQ99453 RN7SKP62-201ENST00000384539 329 ntBASIC6.35□□□□□ -1.39
PHOX2BQ99453 MIR550A3-201ENST00000390735 95 ntBASIC6.35□□□□□ -1.39
PHOX2BQ99453 RNU2-43P-201ENST00000410306 190 ntBASIC6.35□□□□□ -1.39
PHOX2BQ99453 RN7SKP281-201ENST00000410472 352 ntBASIC6.35□□□□□ -1.39
PHOX2BQ99453 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.35□□□□□ -1.39
PHOX2BQ99453 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PHOX2BQ99453 AL353621.1-201ENST00000418219 243 ntBASIC6.35□□□□□ -1.39
PHOX2BQ99453 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.35□□□□□ -1.39
PHOX2BQ99453 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.35□□□□□ -1.39
PHOX2BQ99453 RNU6-1095P-201ENST00000516148 108 ntBASIC6.35□□□□□ -1.39
PHOX2BQ99453 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.35□□□□□ -1.39
PHOX2BQ99453 AL591767.3-201ENST00000554632 525 ntBASIC6.35□□□□□ -1.39
PHOX2BQ99453 AP003115.1-201ENST00000569849 463 ntBASIC6.35□□□□□ -1.39
PHOX2BQ99453 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC6.35□□□□□ -1.39
PHOX2BQ99453 RN7SL208P-201ENST00000577964 296 ntBASIC6.35□□□□□ -1.39
PHOX2BQ99453 MIR4697-201ENST00000582977 78 ntBASIC6.35□□□□□ -1.39
PHOX2BQ99453 AP000787.2-201ENST00000604432 568 ntBASIC6.35□□□□□ -1.39
PHOX2BQ99453 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.35□□□□□ -1.39
PHOX2BQ99453 AL691477.1-201ENST00000624398 162 ntBASIC6.35□□□□□ -1.39
PHOX2BQ99453 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC6.35□□□□□ -1.39
PHOX2BQ99453 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.35□□□□□ -1.39
PHOX2BQ99453 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.35□□□□□ -1.39
PHOX2BQ99453 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
PHOX2BQ99453 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
PHOX2BQ99453 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PHOX2BQ99453 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms