Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC233728.2-201ENST00000425348 757 ntBASIC3.47□□□□□ -1.85
CCNA1P78396 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.47□□□□□ -1.85
CCNA1P78396 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.47□□□□□ -1.85
CCNA1P78396 AC105272.1-201ENST00000438604 198 ntBASIC3.47□□□□□ -1.85
CCNA1P78396 AC092170.1-201ENST00000440211 356 ntBASIC3.47□□□□□ -1.85
CCNA1P78396 RPS24P13-201ENST00000442520 397 ntBASIC3.47□□□□□ -1.85
CCNA1P78396 RAB11AP1-201ENST00000442978 646 ntBASIC3.47□□□□□ -1.85
CCNA1P78396 AL135938.1-201ENST00000443141 297 ntBASIC3.47□□□□□ -1.85
CCNA1P78396 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.47□□□□□ -1.85
CCNA1P78396 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.47□□□□□ -1.85
CCNA1P78396 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.47□□□□□ -1.85
CCNA1P78396 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.47□□□□□ -1.85
CCNA1P78396 RPL23AP14-201ENST00000468281 468 ntBASIC3.47□□□□□ -1.85
CCNA1P78396 MTCO3P44-201ENST00000510977 541 ntBASIC3.47□□□□□ -1.85
CCNA1P78396 RN7SKP60-201ENST00000516985 239 ntBASIC3.47□□□□□ -1.85
CCNA1P78396 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.47□□□□□ -1.85
CCNA1P78396 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.47□□□□□ -1.85
CCNA1P78396 KATNBL1P1-201ENST00000605192 748 ntBASIC3.47□□□□□ -1.85
CCNA1P78396 AC006111.3-201ENST00000622137 383 ntBASIC3.47□□□□□ -1.85
CCNA1P78396 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
CCNA1P78396 AC025263.3-201ENST00000622965 1396 ntBASIC3.47□□□□□ -1.85
CCNA1P78396 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCNA1P78396 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCNA1P78396 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCNA1P78396 AL645568.2-201ENST00000432815 1337 ntBASIC3.46□□□□□ -1.85
CCNA1P78396 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCNA1P78396 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.46□□□□□ -1.86
CCNA1P78396 FTLP6-201ENST00000355274 422 ntBASIC3.46□□□□□ -1.86
CCNA1P78396 MIR449A-201ENST00000362113 91 ntBASIC3.46□□□□□ -1.86
CCNA1P78396 RNU6-1249P-201ENST00000363237 111 ntBASIC3.46□□□□□ -1.86
CCNA1P78396 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCNA1P78396 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CCNA1P78396 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CCNA1P78396 RNU6-821P-201ENST00000390995 107 ntBASIC3.46□□□□□ -1.86
CCNA1P78396 RNA5SP80-201ENST00000410475 111 ntBASIC3.46□□□□□ -1.86
CCNA1P78396 RNU6-1077P-201ENST00000410506 102 ntBASIC3.46□□□□□ -1.86
CCNA1P78396 PAICSP7-201ENST00000419829 962 ntBASIC3.46□□□□□ -1.86
CCNA1P78396 AC233981.1-201ENST00000423224 461 ntBASIC3.46□□□□□ -1.86
CCNA1P78396 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.46□□□□□ -1.86
CCNA1P78396 DPPA2P1-201ENST00000428060 556 ntBASIC3.46□□□□□ -1.86
CCNA1P78396 HSPE1P28-201ENST00000443139 211 ntBASIC3.46□□□□□ -1.86
CCNA1P78396 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.46□□□□□ -1.86
CCNA1P78396 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.46□□□□□ -1.86
CCNA1P78396 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.46□□□□□ -1.86
CCNA1P78396 AC117440.1-201ENST00000474107 571 ntBASIC3.46□□□□□ -1.86
CCNA1P78396 GAPDHP39-201ENST00000481866 979 ntBASIC3.46□□□□□ -1.86
CCNA1P78396 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.46□□□□□ -1.86
CCNA1P78396 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.46□□□□□ -1.86
CCNA1P78396 AL391156.1-201ENST00000554965 554 ntBASIC3.46□□□□□ -1.86
CCNA1P78396 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.46□□□□□ -1.86
CCNA1P78396 AL390838.2-201ENST00000602394 274 ntBASIC3.46□□□□□ -1.86
CCNA1P78396 AL133393.1-201ENST00000603277 287 ntBASIC3.46□□□□□ -1.86
CCNA1P78396 AC025588.3-201ENST00000604182 274 ntBASIC3.46□□□□□ -1.86
CCNA1P78396 AC073387.2-201ENST00000604797 784 ntBASIC3.46□□□□□ -1.86
CCNA1P78396 AC245100.7-201ENST00000609678 442 ntBASIC3.46□□□□□ -1.86
CCNA1P78396 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCNA1P78396 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.46□□□□□ -1.86
CCNA1P78396 AL356490.1-201ENST00000623079 479 ntBASIC3.46□□□□□ -1.86
CCNA1P78396 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.46□□□□□ -1.86
CCNA1P78396 MTND5P31-201ENST00000419366 1374 ntBASIC3.46□□□□□ -1.86
CCNA1P78396 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCNA1P78396 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCNA1P78396 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
CCNA1P78396 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.45□□□□□ -1.86
CCNA1P78396 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCNA1P78396 AL356057.1-202ENST00000402263 756 ntBASIC3.45□□□□□ -1.86
CCNA1P78396 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
CCNA1P78396 RNA5SP184-201ENST00000411071 108 ntBASIC3.45□□□□□ -1.86
CCNA1P78396 YPEL5P1-201ENST00000419731 367 ntBASIC3.45□□□□□ -1.86
CCNA1P78396 AL645937.1-202ENST00000421799 937 ntBASIC3.45□□□□□ -1.86
CCNA1P78396 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.45□□□□□ -1.86
CCNA1P78396 MTND3P4-201ENST00000453537 303 ntBASIC3.45□□□□□ -1.86
CCNA1P78396 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.45□□□□□ -1.86
CCNA1P78396 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.45□□□□□ -1.86
CCNA1P78396 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
CCNA1P78396 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.45□□□□□ -1.86
CCNA1P78396 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.45□□□□□ -1.86
CCNA1P78396 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CCNA1P78396 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.45□□□□□ -1.86
CCNA1P78396 HSPE1P14-201ENST00000605812 302 ntBASIC3.45□□□□□ -1.86
CCNA1P78396 AC096586.1-201ENST00000610267 561 ntBASIC3.45□□□□□ -1.86
CCNA1P78396 AL591516.1-201ENST00000611326 274 ntBASIC3.45□□□□□ -1.86
CCNA1P78396 AC090116.1-201ENST00000615679 446 ntBASIC3.45□□□□□ -1.86
CCNA1P78396 AC002076.2-201ENST00000617362 122 ntBASIC3.45□□□□□ -1.86
CCNA1P78396 AL360181.4-201ENST00000621752 134 ntBASIC3.45□□□□□ -1.86
CCNA1P78396 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.45□□□□□ -1.86
CCNA1P78396 AC073476.4-201ENST00000628409 72 ntBASIC3.45□□□□□ -1.86
CCNA1P78396 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.45□□□□□ -1.86
CCNA1P78396 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.45□□□□□ -1.86
CCNA1P78396 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.45□□□□□ -1.86
CCNA1P78396 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCNA1P78396 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CCNA1P78396 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.44□□□□□ -1.86
CCNA1P78396 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.44□□□□□ -1.86
CCNA1P78396 AL445669.2-201ENST00000454425 421 ntBASIC3.44□□□□□ -1.86
CCNA1P78396 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.44□□□□□ -1.86
CCNA1P78396 PRELID3BP6-201ENST00000503839 571 ntBASIC3.44□□□□□ -1.86
CCNA1P78396 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.44□□□□□ -1.86
CCNA1P78396 SNORA48.9-201ENST00000516419 162 ntBASIC3.44□□□□□ -1.86
CCNA1P78396 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms