Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.54□□□□□ -1.52
CHMP4BP1P59074 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.54□□□□□ -1.52
CHMP4BP1P59074 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.54□□□□□ -1.52
CHMP4BP1P59074 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.54□□□□□ -1.52
CHMP4BP1P59074 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.54□□□□□ -1.52
CHMP4BP1P59074 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.54□□□□□ -1.52
CHMP4BP1P59074 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.54□□□□□ -1.52
CHMP4BP1P59074 OR10AB1P-201ENST00000609613 938 ntBASIC5.54□□□□□ -1.52
CHMP4BP1P59074 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.54□□□□□ -1.52
CHMP4BP1P59074 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.54□□□□□ -1.52
CHMP4BP1P59074 AC112204.3-201ENST00000623822 332 ntBASIC5.54□□□□□ -1.52
CHMP4BP1P59074 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.54□□□□□ -1.52
CHMP4BP1P59074 AC092125.1-201ENST00000562568 1995 ntBASIC5.54□□□□□ -1.52
CHMP4BP1P59074 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHMP4BP1P59074 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHMP4BP1P59074 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHMP4BP1P59074 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CHMP4BP1P59074 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CHMP4BP1P59074 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
CHMP4BP1P59074 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 AC079741.1-201ENST00000321498 212 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 Y_RNA.58-201ENST00000362807 102 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 Y_RNA.154-201ENST00000363624 102 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 RNY3P1-201ENST00000365085 102 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 RNY3-201ENST00000365484 102 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 SNORA69-201ENST00000383895 132 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 Y_RNA.481-201ENST00000384373 102 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 Y_RNA.490-201ENST00000384413 102 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 RNU6-456P-201ENST00000384493 107 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 RPL32P23-201ENST00000397237 405 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 MIR298-201ENST00000401212 88 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 FAT1P1-201ENST00000406588 507 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 RN7SKP106-201ENST00000410832 272 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 RSU1P3-201ENST00000412878 835 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 PSMA6P3-201ENST00000428242 164 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 RPL23AP30-201ENST00000432419 501 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 CALM1P1-201ENST00000442082 433 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 RN7SKP46-201ENST00000515942 234 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 AC055876.1-202ENST00000567053 138 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 AC018638.8-201ENST00000588755 281 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 MIR8069-1-201ENST00000616627 86 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 MIR8069-2-201ENST00000621412 86 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 AC138649.5-201ENST00000637456 137 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 AL672167.1-205ENST00000641112 3080 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHMP4BP1P59074 AL592437.2-201ENST00000421655 2434 ntBASIC5.53□□□□□ -1.52
CHMP4BP1P59074 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.52□□□□□ -1.53
CHMP4BP1P59074 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP4BP1P59074 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CHMP4BP1P59074 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.52□□□□□ -1.53
CHMP4BP1P59074 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.52□□□□□ -1.53
CHMP4BP1P59074 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP4BP1P59074 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP4BP1P59074 AL359893.1-201ENST00000447628 1580 ntBASIC5.52□□□□□ -1.53
CHMP4BP1P59074 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.52□□□□□ -1.53
CHMP4BP1P59074 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CHMP4BP1P59074 Y_RNA.72-201ENST00000362894 103 ntBASIC5.52□□□□□ -1.53
CHMP4BP1P59074 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHMP4BP1P59074 RNU6-767P-201ENST00000384132 107 ntBASIC5.52□□□□□ -1.53
CHMP4BP1P59074 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.52□□□□□ -1.53
CHMP4BP1P59074 RPL31P45-201ENST00000419532 356 ntBASIC5.52□□□□□ -1.53
CHMP4BP1P59074 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.52□□□□□ -1.53
CHMP4BP1P59074 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.52□□□□□ -1.53
CHMP4BP1P59074 AL049734.2-201ENST00000441066 616 ntBASIC5.52□□□□□ -1.53
CHMP4BP1P59074 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms