Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NCKAP1LP55160 RNU6-317P-201ENST00000384031 107 ntBASIC5.08□□□□□ -1.6
NCKAP1LP55160 RNU6-463P-201ENST00000384340 107 ntBASIC5.08□□□□□ -1.6
NCKAP1LP55160 RNU6-456P-201ENST00000384493 107 ntBASIC5.08□□□□□ -1.6
NCKAP1LP55160 RNU6-907P-201ENST00000390924 102 ntBASIC5.08□□□□□ -1.6
NCKAP1LP55160 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
NCKAP1LP55160 Z98745.1-201ENST00000402553 494 ntBASIC5.08□□□□□ -1.6
NCKAP1LP55160 MRPL42P2-201ENST00000403169 426 ntBASIC5.08□□□□□ -1.6
NCKAP1LP55160 TPMTP2-201ENST00000414372 726 ntBASIC5.08□□□□□ -1.6
NCKAP1LP55160 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.08□□□□□ -1.6
NCKAP1LP55160 FABP7P2-201ENST00000429946 379 ntBASIC5.08□□□□□ -1.6
NCKAP1LP55160 GTF2IP13-201ENST00000438487 386 ntBASIC5.08□□□□□ -1.6
NCKAP1LP55160 ISCUP1-201ENST00000454451 448 ntBASIC5.08□□□□□ -1.6
NCKAP1LP55160 CYCSP34-201ENST00000458172 304 ntBASIC5.08□□□□□ -1.6
NCKAP1LP55160 RPS29P22-201ENST00000472363 168 ntBASIC5.08□□□□□ -1.6
NCKAP1LP55160 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.08□□□□□ -1.6
NCKAP1LP55160 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.08□□□□□ -1.6
NCKAP1LP55160 KLHL2P1-201ENST00000508691 521 ntBASIC5.08□□□□□ -1.6
NCKAP1LP55160 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.08□□□□□ -1.6
NCKAP1LP55160 IGKV2-36-201ENST00000519999 223 ntBASIC5.08□□□□□ -1.6
NCKAP1LP55160 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.08□□□□□ -1.6
NCKAP1LP55160 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.08□□□□□ -1.6
NCKAP1LP55160 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.08□□□□□ -1.6
NCKAP1LP55160 AL355836.1-201ENST00000555951 870 ntBASIC5.08□□□□□ -1.6
NCKAP1LP55160 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.08□□□□□ -1.6
NCKAP1LP55160 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.08□□□□□ -1.6
NCKAP1LP55160 MIR5186-201ENST00000577504 120 ntBASIC5.08□□□□□ -1.6
NCKAP1LP55160 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NCKAP1LP55160 RNF138P2-201ENST00000603490 592 ntBASIC5.08□□□□□ -1.6
NCKAP1LP55160 AC136443.5-201ENST00000603741 370 ntBASIC5.08□□□□□ -1.6
NCKAP1LP55160 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NCKAP1LP55160 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.08□□□□□ -1.6
NCKAP1LP55160 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NCKAP1LP55160 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NCKAP1LP55160 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
NCKAP1LP55160 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NCKAP1LP55160 USP9YP4-201ENST00000424401 1745 ntBASIC5.08□□□□□ -1.6
NCKAP1LP55160 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.08□□□□□ -1.6
NCKAP1LP55160 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NCKAP1LP55160 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
NCKAP1LP55160 OR14L1P-202ENST00000641545 3009 ntBASIC5.07□□□□□ -1.6
NCKAP1LP55160 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NCKAP1LP55160 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NCKAP1LP55160 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NCKAP1LP55160 CASC19-284ENST00000642142 1868 ntBASIC5.07□□□□□ -1.6
NCKAP1LP55160 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.07□□□□□ -1.6
NCKAP1LP55160 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
NCKAP1LP55160 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NCKAP1LP55160 MTND4P35-201ENST00000604257 1375 ntBASIC5.07□□□□□ -1.6
NCKAP1LP55160 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.07□□□□□ -1.6
NCKAP1LP55160 AC022031.1-201ENST00000585985 2593 ntBASIC5.07□□□□□ -1.6
NCKAP1LP55160 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NCKAP1LP55160 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.07□□□□□ -1.6
NCKAP1LP55160 RNU6-223P-201ENST00000362830 107 ntBASIC5.07□□□□□ -1.6
NCKAP1LP55160 RNU6-254P-201ENST00000363377 107 ntBASIC5.07□□□□□ -1.6
NCKAP1LP55160 RNA5SP505-201ENST00000364748 108 ntBASIC5.07□□□□□ -1.6
NCKAP1LP55160 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.07□□□□□ -1.6
NCKAP1LP55160 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.07□□□□□ -1.6
NCKAP1LP55160 Y_RNA.384-201ENST00000383909 102 ntBASIC5.07□□□□□ -1.6
NCKAP1LP55160 Y_RNA.387-201ENST00000383918 102 ntBASIC5.07□□□□□ -1.6
NCKAP1LP55160 AL136116.1-201ENST00000403591 381 ntBASIC5.07□□□□□ -1.6
NCKAP1LP55160 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.07□□□□□ -1.6
NCKAP1LP55160 AC073136.2-201ENST00000417282 849 ntBASIC5.07□□□□□ -1.6
NCKAP1LP55160 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.07□□□□□ -1.6
NCKAP1LP55160 MTCYBP8-201ENST00000422855 651 ntBASIC5.07□□□□□ -1.6
NCKAP1LP55160 HMGB1P18-201ENST00000438801 619 ntBASIC5.07□□□□□ -1.6
NCKAP1LP55160 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.07□□□□□ -1.6
NCKAP1LP55160 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.07□□□□□ -1.6
NCKAP1LP55160 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.07□□□□□ -1.6
NCKAP1LP55160 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.07□□□□□ -1.6
NCKAP1LP55160 RN7SL354P-201ENST00000469282 294 ntBASIC5.07□□□□□ -1.6
NCKAP1LP55160 AC008897.1-201ENST00000494006 347 ntBASIC5.07□□□□□ -1.6
NCKAP1LP55160 AC110792.2-201ENST00000510278 224 ntBASIC5.07□□□□□ -1.6
NCKAP1LP55160 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.07□□□□□ -1.6
NCKAP1LP55160 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.07□□□□□ -1.6
NCKAP1LP55160 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.07□□□□□ -1.6
NCKAP1LP55160 AC093012.1-202ENST00000549403 582 ntBASIC5.07□□□□□ -1.6
NCKAP1LP55160 HMGB1P6-201ENST00000569046 646 ntBASIC5.07□□□□□ -1.6
NCKAP1LP55160 MIR4742-201ENST00000581069 85 ntBASIC5.07□□□□□ -1.6
NCKAP1LP55160 AC209154.1-201ENST00000582156 337 ntBASIC5.07□□□□□ -1.6
NCKAP1LP55160 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.07□□□□□ -1.6
NCKAP1LP55160 AC010525.2-201ENST00000590920 195 ntBASIC5.07□□□□□ -1.6
NCKAP1LP55160 AC090617.10-201ENST00000624308 134 ntBASIC5.07□□□□□ -1.6
NCKAP1LP55160 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.07□□□□□ -1.6
NCKAP1LP55160 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.07□□□□□ -1.6
NCKAP1LP55160 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.07□□□□□ -1.6
NCKAP1LP55160 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.07□□□□□ -1.6
NCKAP1LP55160 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NCKAP1LP55160 AL391684.1-202ENST00000641293 1636 ntBASIC5.07□□□□□ -1.6
NCKAP1LP55160 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NCKAP1LP55160 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NCKAP1LP55160 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.07□□□□□ -1.6
NCKAP1LP55160 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NCKAP1LP55160 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NCKAP1LP55160 AP002907.1-201ENST00000606361 1430 ntBASIC5.06□□□□□ -1.6
NCKAP1LP55160 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NCKAP1LP55160 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
NCKAP1LP55160 MTND5P16-201ENST00000460269 1703 ntBASIC5.06□□□□□ -1.6
NCKAP1LP55160 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NCKAP1LP55160 AL606537.1-201ENST00000607258 2011 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms