Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PROM1O43490 AC005086.4-201ENST00000623065 213 ntBASIC4.39□□□□□ -1.71
PROM1O43490 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PROM1O43490 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
PROM1O43490 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PROM1O43490 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PROM1O43490 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PROM1O43490 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PROM1O43490 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PROM1O43490 AC010928.1-201ENST00000592477 1447 ntBASIC4.38□□□□□ -1.71
PROM1O43490 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
PROM1O43490 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PROM1O43490 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PROM1O43490 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PROM1O43490 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.38□□□□□ -1.71
PROM1O43490 MAPK10-303ENST00000641324 3959 ntBASIC4.38□□□□□ -1.71
PROM1O43490 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.38□□□□□ -1.71
PROM1O43490 CCT4P2-201ENST00000233836 1548 ntBASIC4.38□□□□□ -1.71
PROM1O43490 RNU1-20P-201ENST00000363314 162 ntBASIC4.38□□□□□ -1.71
PROM1O43490 U3.15-201ENST00000365398 212 ntBASIC4.38□□□□□ -1.71
PROM1O43490 SNORA51.6-201ENST00000384151 125 ntBASIC4.38□□□□□ -1.71
PROM1O43490 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PROM1O43490 SNORD115.1-201ENST00000391109 76 ntBASIC4.38□□□□□ -1.71
PROM1O43490 MIR298-201ENST00000401212 88 ntBASIC4.38□□□□□ -1.71
PROM1O43490 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.38□□□□□ -1.71
PROM1O43490 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.38□□□□□ -1.71
PROM1O43490 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.38□□□□□ -1.71
PROM1O43490 PIGFP2-201ENST00000421400 651 ntBASIC4.38□□□□□ -1.71
PROM1O43490 RPL18P10-201ENST00000425606 538 ntBASIC4.38□□□□□ -1.71
PROM1O43490 AL589872.1-201ENST00000426602 288 ntBASIC4.38□□□□□ -1.71
PROM1O43490 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.38□□□□□ -1.71
PROM1O43490 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.38□□□□□ -1.71
PROM1O43490 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.38□□□□□ -1.71
PROM1O43490 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.38□□□□□ -1.71
PROM1O43490 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PROM1O43490 PABPC1P3-201ENST00000469174 459 ntBASIC4.38□□□□□ -1.71
PROM1O43490 RN7SL41P-201ENST00000476144 297 ntBASIC4.38□□□□□ -1.71
PROM1O43490 AP001025.2-201ENST00000490908 477 ntBASIC4.38□□□□□ -1.71
PROM1O43490 AC090453.1-201ENST00000495560 436 ntBASIC4.38□□□□□ -1.71
PROM1O43490 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.38□□□□□ -1.71
PROM1O43490 AC025465.4-201ENST00000513422 638 ntBASIC4.38□□□□□ -1.71
PROM1O43490 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.38□□□□□ -1.71
PROM1O43490 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.38□□□□□ -1.71
PROM1O43490 Y_RNA.672-201ENST00000516289 104 ntBASIC4.38□□□□□ -1.71
PROM1O43490 RNU6-1003P-201ENST00000517099 105 ntBASIC4.38□□□□□ -1.71
PROM1O43490 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.38□□□□□ -1.71
PROM1O43490 MTND1P35-201ENST00000526739 508 ntBASIC4.38□□□□□ -1.71
PROM1O43490 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.38□□□□□ -1.71
PROM1O43490 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
PROM1O43490 AL512360.1-201ENST00000555346 234 ntBASIC4.38□□□□□ -1.71
PROM1O43490 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.38□□□□□ -1.71
PROM1O43490 AL845331.3-202ENST00000562856 261 ntBASIC4.38□□□□□ -1.71
PROM1O43490 AC034268.2-201ENST00000571784 482 ntBASIC4.38□□□□□ -1.71
PROM1O43490 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.38□□□□□ -1.71
PROM1O43490 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.38□□□□□ -1.71
PROM1O43490 AL139286.1-201ENST00000604465 483 ntBASIC4.38□□□□□ -1.71
PROM1O43490 AC008536.2-201ENST00000607284 349 ntBASIC4.38□□□□□ -1.71
PROM1O43490 AC019193.2-201ENST00000610012 634 ntBASIC4.38□□□□□ -1.71
PROM1O43490 AC068722.2-201ENST00000618734 544 ntBASIC4.38□□□□□ -1.71
PROM1O43490 U3.53-201ENST00000628922 216 ntBASIC4.38□□□□□ -1.71
PROM1O43490 AC099654.5-201ENST00000636479 350 ntBASIC4.38□□□□□ -1.71
PROM1O43490 MFSD8-242ENST00000641690 4199 ntBASIC4.38□□□□□ -1.71
PROM1O43490 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PROM1O43490 MTND4P12-201ENST00000498999 1377 ntBASIC4.38□□□□□ -1.71
PROM1O43490 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
PROM1O43490 AL354685.2-201ENST00000448218 1447 ntBASIC4.38□□□□□ -1.71
PROM1O43490 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.37□□□□□ -1.71
PROM1O43490 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PROM1O43490 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
PROM1O43490 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
PROM1O43490 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.37□□□□□ -1.71
PROM1O43490 AC017104.4-201ENST00000636283 1592 ntBASIC4.37□□□□□ -1.71
PROM1O43490 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PROM1O43490 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PROM1O43490 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.37□□□□□ -1.71
PROM1O43490 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.37□□□□□ -1.71
PROM1O43490 AL160275.2-201ENST00000412010 394 ntBASIC4.37□□□□□ -1.71
PROM1O43490 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.37□□□□□ -1.71
PROM1O43490 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.37□□□□□ -1.71
PROM1O43490 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.37□□□□□ -1.71
PROM1O43490 AC069213.2-201ENST00000420238 366 ntBASIC4.37□□□□□ -1.71
PROM1O43490 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.37□□□□□ -1.71
PROM1O43490 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.37□□□□□ -1.71
PROM1O43490 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PROM1O43490 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.37□□□□□ -1.71
PROM1O43490 RPL23AP74-201ENST00000437246 471 ntBASIC4.37□□□□□ -1.71
PROM1O43490 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.37□□□□□ -1.71
PROM1O43490 ISCUP1-201ENST00000454451 448 ntBASIC4.37□□□□□ -1.71
PROM1O43490 TRBV26-201ENST00000456572 344 ntBASIC4.37□□□□□ -1.71
PROM1O43490 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.37□□□□□ -1.71
PROM1O43490 SCARNA10-201ENST00000459255 330 ntBASIC4.37□□□□□ -1.71
PROM1O43490 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.37□□□□□ -1.71
PROM1O43490 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PROM1O43490 AC007016.1-201ENST00000512110 244 ntBASIC4.37□□□□□ -1.71
PROM1O43490 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.37□□□□□ -1.71
PROM1O43490 AC046134.1-201ENST00000514454 666 ntBASIC4.37□□□□□ -1.71
PROM1O43490 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.37□□□□□ -1.71
PROM1O43490 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.37□□□□□ -1.71
PROM1O43490 AP003181.2-201ENST00000528941 181 ntBASIC4.37□□□□□ -1.71
PROM1O43490 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms