Protein–RNA interactions for Protein: S4R3C0

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S4R3C0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
S4R3C0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
S4R3C0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
S4R3C0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.13■□□□□ 0.01
S4R3C0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
S4R3C0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
S4R3C0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
S4R3C0 AC239809.2-201ENST00000415381 517 ntBASIC15.13■□□□□ 0.01
S4R3C0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC15.13■□□□□ 0.01
S4R3C0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.13■□□□□ 0.01
S4R3C0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.13■□□□□ 0.01
S4R3C0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.13■□□□□ 0.01
S4R3C0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.13■□□□□ 0.01
S4R3C0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
S4R3C0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.13■□□□□ 0.01
S4R3C0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
S4R3C0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.13■□□□□ 0.01
S4R3C0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
S4R3C0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
S4R3C0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
S4R3C0 AC073648.6-201ENST00000641589 218 ntBASIC15.13■□□□□ 0.01
S4R3C0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
S4R3C0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
S4R3C0 AC018445.3-201ENST00000624177 1945 ntBASIC15.13■□□□□ 0.01
S4R3C0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.13■□□□□ 0.01
S4R3C0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.13■□□□□ 0.01
S4R3C0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
S4R3C0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
S4R3C0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
S4R3C0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
S4R3C0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
S4R3C0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.13■□□□□ 0.01
S4R3C0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
S4R3C0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.13■□□□□ 0.01
S4R3C0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.13■□□□□ 0.01
S4R3C0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.13■□□□□ 0.01
S4R3C0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
S4R3C0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.13■□□□□ 0.01
S4R3C0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
S4R3C0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
S4R3C0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
S4R3C0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
S4R3C0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.12■□□□□ 0.01
S4R3C0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
S4R3C0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
S4R3C0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
S4R3C0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
S4R3C0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
S4R3C0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.12■□□□□ 0.01
S4R3C0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
S4R3C0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
S4R3C0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
S4R3C0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.12■□□□□ 0.01
S4R3C0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.12■□□□□ 0.01
S4R3C0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.12■□□□□ 0.01
S4R3C0 TSPY20P-201ENST00000450910 630 ntBASIC15.12■□□□□ 0.01
S4R3C0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.12■□□□□ 0.01
S4R3C0 KRT18P16-201ENST00000510337 1294 ntBASIC15.12■□□□□ 0.01
S4R3C0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.12■□□□□ 0.01
S4R3C0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
S4R3C0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.12■□□□□ 0.01
S4R3C0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
S4R3C0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
S4R3C0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.12■□□□□ 0.01
S4R3C0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
S4R3C0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
S4R3C0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
S4R3C0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
S4R3C0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.12■□□□□ 0.01
S4R3C0 AL049812.1-201ENST00000432563 2267 ntBASIC15.12■□□□□ 0.01
S4R3C0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
S4R3C0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
S4R3C0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
S4R3C0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
S4R3C0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.11■□□□□ 0.01
S4R3C0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
S4R3C0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
S4R3C0 AC004408.2-201ENST00000623613 2777 ntBASIC15.11■□□□□ 0.01
S4R3C0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
S4R3C0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
S4R3C0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
S4R3C0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.11■□□□□ 0.01
S4R3C0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.11■□□□□ 0.01
S4R3C0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
S4R3C0 AC128676.1-201ENST00000454392 318 ntBASIC15.11■□□□□ 0.01
S4R3C0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.11■□□□□ 0.01
S4R3C0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
S4R3C0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.11■□□□□ 0.01
S4R3C0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
S4R3C0 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.11■□□□□ 0.01
S4R3C0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
S4R3C0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.11■□□□□ 0.01
S4R3C0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.11■□□□□ 0.01
S4R3C0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
S4R3C0 TEX21P-204ENST00000641479 1693 ntBASIC15.11■□□□□ 0.01
S4R3C0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
S4R3C0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.11■□□□□ 0.01
S4R3C0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
S4R3C0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
S4R3C0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms