Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
GTF3C3Q9Y5Q9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.71
GTF3C3Q9Y5Q9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
GTF3C3Q9Y5Q9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.71
GTF3C3Q9Y5Q9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.71
GTF3C3Q9Y5Q9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
GTF3C3Q9Y5Q9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
GTF3C3Q9Y5Q9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
GTF3C3Q9Y5Q9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC25.7■■□□□ 1.7
GTF3C3Q9Y5Q9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC25.7■■□□□ 1.7
GTF3C3Q9Y5Q9 SLC47A1P1-202ENST00000449666 945 ntBASIC25.7■■□□□ 1.7
GTF3C3Q9Y5Q9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC25.7■■□□□ 1.7
GTF3C3Q9Y5Q9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC25.7■■□□□ 1.7
GTF3C3Q9Y5Q9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC25.7■■□□□ 1.7
GTF3C3Q9Y5Q9 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
GTF3C3Q9Y5Q9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
GTF3C3Q9Y5Q9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
GTF3C3Q9Y5Q9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
GTF3C3Q9Y5Q9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC25.69■■□□□ 1.7
GTF3C3Q9Y5Q9 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC25.69■■□□□ 1.7
GTF3C3Q9Y5Q9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
GTF3C3Q9Y5Q9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
GTF3C3Q9Y5Q9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
GTF3C3Q9Y5Q9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
GTF3C3Q9Y5Q9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC25.69■■□□□ 1.7
GTF3C3Q9Y5Q9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
GTF3C3Q9Y5Q9 AC010997.5-201ENST00000609182 354 ntBASIC25.69■■□□□ 1.7
GTF3C3Q9Y5Q9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC25.69■■□□□ 1.7
GTF3C3Q9Y5Q9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC25.69■■□□□ 1.7
GTF3C3Q9Y5Q9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
GTF3C3Q9Y5Q9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC25.69■■□□□ 1.7
GTF3C3Q9Y5Q9 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
GTF3C3Q9Y5Q9 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
GTF3C3Q9Y5Q9 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
GTF3C3Q9Y5Q9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
GTF3C3Q9Y5Q9 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC25.68■■□□□ 1.7
GTF3C3Q9Y5Q9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC25.68■■□□□ 1.7
GTF3C3Q9Y5Q9 AC004987.1-201ENST00000428627 508 ntBASIC25.68■■□□□ 1.7
GTF3C3Q9Y5Q9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC25.68■■□□□ 1.7
GTF3C3Q9Y5Q9 KRT8P33-201ENST00000508125 1423 ntBASIC25.68■■□□□ 1.7
GTF3C3Q9Y5Q9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
GTF3C3Q9Y5Q9 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
GTF3C3Q9Y5Q9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC25.68■■□□□ 1.7
GTF3C3Q9Y5Q9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
GTF3C3Q9Y5Q9 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
GTF3C3Q9Y5Q9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC25.68■■□□□ 1.7
GTF3C3Q9Y5Q9 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
GTF3C3Q9Y5Q9 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
GTF3C3Q9Y5Q9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
GTF3C3Q9Y5Q9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
GTF3C3Q9Y5Q9 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
GTF3C3Q9Y5Q9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
GTF3C3Q9Y5Q9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.67■■□□□ 1.7
GTF3C3Q9Y5Q9 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC25.67■■□□□ 1.7
GTF3C3Q9Y5Q9 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
GTF3C3Q9Y5Q9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
GTF3C3Q9Y5Q9 AC245052.3-201ENST00000450182 901 ntBASIC25.67■■□□□ 1.7
GTF3C3Q9Y5Q9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
GTF3C3Q9Y5Q9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
GTF3C3Q9Y5Q9 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
GTF3C3Q9Y5Q9 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC25.67■■□□□ 1.7
GTF3C3Q9Y5Q9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC25.67■■□□□ 1.7
GTF3C3Q9Y5Q9 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
GTF3C3Q9Y5Q9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
GTF3C3Q9Y5Q9 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC25.67■■□□□ 1.7
GTF3C3Q9Y5Q9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC25.67■■□□□ 1.7
GTF3C3Q9Y5Q9 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC25.67■■□□□ 1.7
GTF3C3Q9Y5Q9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC25.67■■□□□ 1.7
GTF3C3Q9Y5Q9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC25.67■■□□□ 1.7
GTF3C3Q9Y5Q9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC25.67■■□□□ 1.7
GTF3C3Q9Y5Q9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC25.66■■□□□ 1.7
GTF3C3Q9Y5Q9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
GTF3C3Q9Y5Q9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
GTF3C3Q9Y5Q9 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
GTF3C3Q9Y5Q9 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
GTF3C3Q9Y5Q9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC25.66■■□□□ 1.7
GTF3C3Q9Y5Q9 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC25.66■■□□□ 1.7
GTF3C3Q9Y5Q9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
GTF3C3Q9Y5Q9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.66■■□□□ 1.7
GTF3C3Q9Y5Q9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC25.66■■□□□ 1.7
GTF3C3Q9Y5Q9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC25.66■■□□□ 1.7
GTF3C3Q9Y5Q9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
GTF3C3Q9Y5Q9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
GTF3C3Q9Y5Q9 AL596257.1-201ENST00000641463 2694 ntBASIC25.66■■□□□ 1.7
GTF3C3Q9Y5Q9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
GTF3C3Q9Y5Q9 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC25.66■■□□□ 1.7
GTF3C3Q9Y5Q9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC25.65■■□□□ 1.7
GTF3C3Q9Y5Q9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
GTF3C3Q9Y5Q9 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC25.65■■□□□ 1.7
GTF3C3Q9Y5Q9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC25.65■■□□□ 1.7
GTF3C3Q9Y5Q9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC25.65■■□□□ 1.7
GTF3C3Q9Y5Q9 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
GTF3C3Q9Y5Q9 RARRES2P2-201ENST00000394842 485 ntBASIC25.65■■□□□ 1.7
GTF3C3Q9Y5Q9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC25.65■■□□□ 1.7
GTF3C3Q9Y5Q9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
GTF3C3Q9Y5Q9 PP12613-201ENST00000424958 2230 ntBASIC25.65■■□□□ 1.7
GTF3C3Q9Y5Q9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC25.65■■□□□ 1.7
GTF3C3Q9Y5Q9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
GTF3C3Q9Y5Q9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.65■■□□□ 1.7
GTF3C3Q9Y5Q9 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms