Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB13Q9Y5F0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.19■□□□□ 0.98
PCDHB13Q9Y5F0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.19■□□□□ 0.98
PCDHB13Q9Y5F0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.19■□□□□ 0.98
PCDHB13Q9Y5F0 AC233702.5-201ENST00000584107 538 ntBASIC21.19■□□□□ 0.98
PCDHB13Q9Y5F0 AL031985.4-201ENST00000642138 673 ntBASIC21.19■□□□□ 0.98
PCDHB13Q9Y5F0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB13Q9Y5F0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB13Q9Y5F0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB13Q9Y5F0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB13Q9Y5F0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB13Q9Y5F0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB13Q9Y5F0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB13Q9Y5F0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB13Q9Y5F0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
PCDHB13Q9Y5F0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB13Q9Y5F0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB13Q9Y5F0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB13Q9Y5F0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB13Q9Y5F0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHB13Q9Y5F0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHB13Q9Y5F0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHB13Q9Y5F0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PCDHB13Q9Y5F0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB13Q9Y5F0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB13Q9Y5F0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB13Q9Y5F0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB13Q9Y5F0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PCDHB13Q9Y5F0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB13Q9Y5F0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB13Q9Y5F0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB13Q9Y5F0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB13Q9Y5F0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 Z85996.1-201ENST00000494644 937 ntBASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 AC008550.1-201ENST00000511500 884 ntBASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 Z99916.2-201ENST00000604037 246 ntBASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 CD177P1-201ENST00000606252 935 ntBASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 AC006213.4-201ENST00000616184 634 ntBASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 TEX21P-204ENST00000641479 1693 ntBASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 AC141586.3-201ENST00000562166 1838 ntBASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 AC087289.5-201ENST00000586076 3175 ntBASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PCDHB13Q9Y5F0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB13Q9Y5F0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDHB13Q9Y5F0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB13Q9Y5F0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.16■□□□□ 0.98
PCDHB13Q9Y5F0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB13Q9Y5F0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB13Q9Y5F0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDHB13Q9Y5F0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB13Q9Y5F0 FAM197Y1-201ENST00000421178 764 ntBASIC21.16■□□□□ 0.98
PCDHB13Q9Y5F0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.16■□□□□ 0.98
PCDHB13Q9Y5F0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.16■□□□□ 0.98
PCDHB13Q9Y5F0 AC026271.3-201ENST00000571884 352 ntBASIC21.16■□□□□ 0.98
PCDHB13Q9Y5F0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB13Q9Y5F0 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB13Q9Y5F0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PCDHB13Q9Y5F0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB13Q9Y5F0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB13Q9Y5F0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PCDHB13Q9Y5F0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB13Q9Y5F0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHB13Q9Y5F0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHB13Q9Y5F0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PCDHB13Q9Y5F0 KRT8P41-201ENST00000533985 1514 ntBASIC21.15■□□□□ 0.98
PCDHB13Q9Y5F0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHB13Q9Y5F0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB13Q9Y5F0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB13Q9Y5F0 MIR718-201ENST00000390190 70 ntBASIC21.15■□□□□ 0.98
PCDHB13Q9Y5F0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
PCDHB13Q9Y5F0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHB13Q9Y5F0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB13Q9Y5F0 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.15■□□□□ 0.98
PCDHB13Q9Y5F0 AL049637.2-201ENST00000641778 930 ntBASIC21.15■□□□□ 0.98
PCDHB13Q9Y5F0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB13Q9Y5F0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB13Q9Y5F0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
PCDHB13Q9Y5F0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB13Q9Y5F0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.15■□□□□ 0.98
PCDHB13Q9Y5F0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB13Q9Y5F0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
PCDHB13Q9Y5F0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms