Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.15■□□□□ 0.5
AP4S1Q9Y587 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP4S1Q9Y587 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
AP4S1Q9Y587 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.15■□□□□ 0.5
AP4S1Q9Y587 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
AP4S1Q9Y587 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AP4S1Q9Y587 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AP4S1Q9Y587 AC096631.2-201ENST00000436136 790 ntBASIC18.15■□□□□ 0.5
AP4S1Q9Y587 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP4S1Q9Y587 AL591742.1-201ENST00000604433 565 ntBASIC18.15■□□□□ 0.5
AP4S1Q9Y587 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
AP4S1Q9Y587 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP4S1Q9Y587 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
AP4S1Q9Y587 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP4S1Q9Y587 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AP4S1Q9Y587 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP4S1Q9Y587 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.15■□□□□ 0.5
AP4S1Q9Y587 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.14■□□□□ 0.5
AP4S1Q9Y587 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.14■□□□□ 0.5
AP4S1Q9Y587 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
AP4S1Q9Y587 MKRN4P-201ENST00000444706 1521 ntBASIC18.14■□□□□ 0.49
AP4S1Q9Y587 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP4S1Q9Y587 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP4S1Q9Y587 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.14■□□□□ 0.49
AP4S1Q9Y587 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
AP4S1Q9Y587 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP4S1Q9Y587 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.14■□□□□ 0.49
AP4S1Q9Y587 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP4S1Q9Y587 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP4S1Q9Y587 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.14■□□□□ 0.49
AP4S1Q9Y587 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP4S1Q9Y587 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.14■□□□□ 0.49
AP4S1Q9Y587 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.14■□□□□ 0.49
AP4S1Q9Y587 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP4S1Q9Y587 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 LINC02228-203ENST00000641970 1355 ntBASIC18.13■□□□□ 0.49
AP4S1Q9Y587 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4S1Q9Y587 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP4S1Q9Y587 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.12■□□□□ 0.49
AP4S1Q9Y587 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.12■□□□□ 0.49
AP4S1Q9Y587 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP4S1Q9Y587 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP4S1Q9Y587 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
AP4S1Q9Y587 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP4S1Q9Y587 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP4S1Q9Y587 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.12■□□□□ 0.49
AP4S1Q9Y587 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP4S1Q9Y587 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.12■□□□□ 0.49
AP4S1Q9Y587 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP4S1Q9Y587 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.12■□□□□ 0.49
AP4S1Q9Y587 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
AP4S1Q9Y587 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.12■□□□□ 0.49
AP4S1Q9Y587 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
AP4S1Q9Y587 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
AP4S1Q9Y587 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
AP4S1Q9Y587 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
AP4S1Q9Y587 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 AC018553.1-201ENST00000616682 1458 ntBASIC18.11■□□□□ 0.49
AP4S1Q9Y587 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP4S1Q9Y587 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms