Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.52■□□□□ 0.72
CHMP2BQ9UQN3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.52■□□□□ 0.72
CHMP2BQ9UQN3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.52■□□□□ 0.72
CHMP2BQ9UQN3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.52■□□□□ 0.72
CHMP2BQ9UQN3 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.52■□□□□ 0.72
CHMP2BQ9UQN3 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.52■□□□□ 0.72
CHMP2BQ9UQN3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.52■□□□□ 0.72
CHMP2BQ9UQN3 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.52■□□□□ 0.72
CHMP2BQ9UQN3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.52■□□□□ 0.72
CHMP2BQ9UQN3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.52■□□□□ 0.72
CHMP2BQ9UQN3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP2BQ9UQN3 IRX1P1-201ENST00000438849 1838 ntBASIC19.52■□□□□ 0.72
CHMP2BQ9UQN3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.52■□□□□ 0.72
CHMP2BQ9UQN3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP2BQ9UQN3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CHMP2BQ9UQN3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHMP2BQ9UQN3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.71
CHMP2BQ9UQN3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHMP2BQ9UQN3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
CHMP2BQ9UQN3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHMP2BQ9UQN3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.52■□□□□ 0.71
CHMP2BQ9UQN3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.52■□□□□ 0.71
CHMP2BQ9UQN3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 AC007613.1-201ENST00000572811 2597 ntBASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 TSPY6P-201ENST00000448518 926 ntBASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 HLA-B-256ENST00000639848 1089 ntBASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 MYC-209ENST00000641252 345 ntBASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 AC009113.1-201ENST00000570267 2443 ntBASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP2BQ9UQN3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 AC097658.1-201ENST00000475555 843 ntBASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 PNMA6B-201ENST00000538162 1200 ntBASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 AC098934.4-201ENST00000564127 592 ntBASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 MIR4758-201ENST00000577688 71 ntBASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP2BQ9UQN3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.49■□□□□ 0.71
CHMP2BQ9UQN3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.49■□□□□ 0.71
CHMP2BQ9UQN3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP2BQ9UQN3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP2BQ9UQN3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP2BQ9UQN3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP2BQ9UQN3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP2BQ9UQN3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.49■□□□□ 0.71
CHMP2BQ9UQN3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP2BQ9UQN3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP2BQ9UQN3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
CHMP2BQ9UQN3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
CHMP2BQ9UQN3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP2BQ9UQN3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CHMP2BQ9UQN3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.49■□□□□ 0.71
CHMP2BQ9UQN3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.49■□□□□ 0.71
CHMP2BQ9UQN3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms