Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC30.61■■■□□ 2.49
RIMBP3Q9UFD9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC30.61■■■□□ 2.49
RIMBP3Q9UFD9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC30.61■■■□□ 2.49
RIMBP3Q9UFD9 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
RIMBP3Q9UFD9 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
RIMBP3Q9UFD9 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC30.61■■■□□ 2.49
RIMBP3Q9UFD9 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
RIMBP3Q9UFD9 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
RIMBP3Q9UFD9 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC30.61■■■□□ 2.49
RIMBP3Q9UFD9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
RIMBP3Q9UFD9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
RIMBP3Q9UFD9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RIMBP3Q9UFD9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC30.6■■■□□ 2.49
RIMBP3Q9UFD9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
RIMBP3Q9UFD9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC30.6■■■□□ 2.49
RIMBP3Q9UFD9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC30.6■■■□□ 2.49
RIMBP3Q9UFD9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
RIMBP3Q9UFD9 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RIMBP3Q9UFD9 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
RIMBP3Q9UFD9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RIMBP3Q9UFD9 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC30.6■■■□□ 2.49
RIMBP3Q9UFD9 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
RIMBP3Q9UFD9 PMP22-202ENST00000395936 816 ntTSL 3 BASIC30.6■■■□□ 2.49
RIMBP3Q9UFD9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC30.6■■■□□ 2.49
RIMBP3Q9UFD9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC30.6■■■□□ 2.49
RIMBP3Q9UFD9 NME1-207ENST00000480143 964 ntTSL 2 BASIC30.6■■■□□ 2.49
RIMBP3Q9UFD9 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC30.6■■■□□ 2.49
RIMBP3Q9UFD9 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC30.6■■■□□ 2.49
RIMBP3Q9UFD9 BNIP3P18-201ENST00000593976 575 ntBASIC30.6■■■□□ 2.49
RIMBP3Q9UFD9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC30.6■■■□□ 2.49
RIMBP3Q9UFD9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC30.6■■■□□ 2.49
RIMBP3Q9UFD9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
RIMBP3Q9UFD9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC30.59■■■□□ 2.49
RIMBP3Q9UFD9 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC30.59■■■□□ 2.49
RIMBP3Q9UFD9 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
RIMBP3Q9UFD9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC30.59■■■□□ 2.49
RIMBP3Q9UFD9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC30.59■■■□□ 2.49
RIMBP3Q9UFD9 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
RIMBP3Q9UFD9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
RIMBP3Q9UFD9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC30.59■■■□□ 2.49
RIMBP3Q9UFD9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC30.59■■■□□ 2.49
RIMBP3Q9UFD9 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC30.59■■■□□ 2.49
RIMBP3Q9UFD9 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
RIMBP3Q9UFD9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
RIMBP3Q9UFD9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC30.59■■■□□ 2.49
RIMBP3Q9UFD9 GPAT2P1-201ENST00000444924 1672 ntBASIC30.58■■■□□ 2.49
RIMBP3Q9UFD9 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
RIMBP3Q9UFD9 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC30.58■■■□□ 2.49
RIMBP3Q9UFD9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC30.58■■■□□ 2.49
RIMBP3Q9UFD9 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC30.58■■■□□ 2.49
RIMBP3Q9UFD9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
RIMBP3Q9UFD9 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
RIMBP3Q9UFD9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
RIMBP3Q9UFD9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
RIMBP3Q9UFD9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
RIMBP3Q9UFD9 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
RIMBP3Q9UFD9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
RIMBP3Q9UFD9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
RIMBP3Q9UFD9 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
RIMBP3Q9UFD9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC30.58■■■□□ 2.49
RIMBP3Q9UFD9 PON3-203ENST00000427422 894 ntTSL 3 BASIC30.58■■■□□ 2.49
RIMBP3Q9UFD9 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
RIMBP3Q9UFD9 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC30.58■■■□□ 2.49
RIMBP3Q9UFD9 GPR32P1-201ENST00000601788 811 ntBASIC30.58■■■□□ 2.49
RIMBP3Q9UFD9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
RIMBP3Q9UFD9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC30.58■■■□□ 2.49
RIMBP3Q9UFD9 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC30.57■■■□□ 2.49
RIMBP3Q9UFD9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC30.57■■■□□ 2.48
RIMBP3Q9UFD9 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC30.57■■■□□ 2.48
RIMBP3Q9UFD9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
RIMBP3Q9UFD9 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
RIMBP3Q9UFD9 PNMT-202ENST00000394246 821 ntTSL 2 BASIC30.57■■■□□ 2.48
RIMBP3Q9UFD9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC30.57■■■□□ 2.48
RIMBP3Q9UFD9 KRT18P3-201ENST00000451602 1288 ntBASIC30.57■■■□□ 2.48
RIMBP3Q9UFD9 IGHV3-41-201ENST00000613121 348 ntBASIC30.57■■■□□ 2.48
RIMBP3Q9UFD9 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC30.57■■■□□ 2.48
RIMBP3Q9UFD9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
RIMBP3Q9UFD9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
RIMBP3Q9UFD9 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC30.56■■■□□ 2.48
RIMBP3Q9UFD9 AC211486.1-202ENST00000416371 468 ntBASIC30.56■■■□□ 2.48
RIMBP3Q9UFD9 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC30.56■■■□□ 2.48
RIMBP3Q9UFD9 AC211476.1-201ENST00000503899 468 ntBASIC30.56■■■□□ 2.48
RIMBP3Q9UFD9 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
RIMBP3Q9UFD9 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC30.56■■■□□ 2.48
RIMBP3Q9UFD9 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
RIMBP3Q9UFD9 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC30.55■■■□□ 2.48
RIMBP3Q9UFD9 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
RIMBP3Q9UFD9 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
RIMBP3Q9UFD9 KRT18P23-201ENST00000435622 1283 ntBASIC30.55■■■□□ 2.48
RIMBP3Q9UFD9 PNKD-204ENST00000436005 978 ntTSL 5 BASIC30.55■■■□□ 2.48
RIMBP3Q9UFD9 FGFR3P6-201ENST00000457012 610 ntBASIC30.55■■■□□ 2.48
RIMBP3Q9UFD9 VENTXP7-201ENST00000475503 772 ntBASIC30.55■■■□□ 2.48
RIMBP3Q9UFD9 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC30.55■■■□□ 2.48
RIMBP3Q9UFD9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
RIMBP3Q9UFD9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
RIMBP3Q9UFD9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
RIMBP3Q9UFD9 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC30.55■■■□□ 2.48
RIMBP3Q9UFD9 AC005332.3-201ENST00000589904 676 ntBASIC30.55■■■□□ 2.48
RIMBP3Q9UFD9 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC30.55■■■□□ 2.48
RIMBP3Q9UFD9 Z83851.2-201ENST00000609564 659 ntBASIC30.55■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms