Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.33■□□□□ 0.2
COMMD9Q9P000 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COMMD9Q9P000 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
COMMD9Q9P000 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COMMD9Q9P000 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COMMD9Q9P000 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
COMMD9Q9P000 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
COMMD9Q9P000 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COMMD9Q9P000 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.33■□□□□ 0.2
COMMD9Q9P000 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COMMD9Q9P000 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COMMD9Q9P000 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.33■□□□□ 0.2
COMMD9Q9P000 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COMMD9Q9P000 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COMMD9Q9P000 NOC2LP2-201ENST00000407594 1944 ntBASIC16.33■□□□□ 0.2
COMMD9Q9P000 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.33■□□□□ 0.2
COMMD9Q9P000 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COMMD9Q9P000 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.33■□□□□ 0.2
COMMD9Q9P000 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
COMMD9Q9P000 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
COMMD9Q9P000 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COMMD9Q9P000 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.33■□□□□ 0.2
COMMD9Q9P000 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
COMMD9Q9P000 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COMMD9Q9P000 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COMMD9Q9P000 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
COMMD9Q9P000 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
COMMD9Q9P000 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD9Q9P000 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.32■□□□□ 0.2
COMMD9Q9P000 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD9Q9P000 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD9Q9P000 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
COMMD9Q9P000 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
COMMD9Q9P000 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD9Q9P000 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.32■□□□□ 0.2
COMMD9Q9P000 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD9Q9P000 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.32■□□□□ 0.2
COMMD9Q9P000 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
COMMD9Q9P000 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
COMMD9Q9P000 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
COMMD9Q9P000 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD9Q9P000 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.32■□□□□ 0.2
COMMD9Q9P000 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD9Q9P000 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.32■□□□□ 0.2
COMMD9Q9P000 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.32■□□□□ 0.2
COMMD9Q9P000 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
COMMD9Q9P000 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD9Q9P000 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
COMMD9Q9P000 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD9Q9P000 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.32■□□□□ 0.2
COMMD9Q9P000 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
COMMD9Q9P000 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
COMMD9Q9P000 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
COMMD9Q9P000 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.32■□□□□ 0.2
COMMD9Q9P000 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
COMMD9Q9P000 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD9Q9P000 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
COMMD9Q9P000 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.32■□□□□ 0.2
COMMD9Q9P000 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD9Q9P000 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD9Q9P000 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD9Q9P000 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD9Q9P000 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD9Q9P000 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD9Q9P000 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
COMMD9Q9P000 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD9Q9P000 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD9Q9P000 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
COMMD9Q9P000 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
COMMD9Q9P000 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD9Q9P000 AC087633.2-202ENST00000565166 1439 ntBASIC16.31■□□□□ 0.2
COMMD9Q9P000 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD9Q9P000 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
COMMD9Q9P000 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD9Q9P000 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.31■□□□□ 0.2
COMMD9Q9P000 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.31■□□□□ 0.2
COMMD9Q9P000 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.31■□□□□ 0.2
COMMD9Q9P000 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.31■□□□□ 0.2
COMMD9Q9P000 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.31■□□□□ 0.2
COMMD9Q9P000 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD9Q9P000 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD9Q9P000 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD9Q9P000 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
COMMD9Q9P000 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.31■□□□□ 0.2
COMMD9Q9P000 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD9Q9P000 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
COMMD9Q9P000 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD9Q9P000 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.31■□□□□ 0.2
COMMD9Q9P000 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD9Q9P000 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.31■□□□□ 0.2
COMMD9Q9P000 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD9Q9P000 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD9Q9P000 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
COMMD9Q9P000 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
COMMD9Q9P000 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.3■□□□□ 0.2
COMMD9Q9P000 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.3■□□□□ 0.2
COMMD9Q9P000 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.3■□□□□ 0.2
COMMD9Q9P000 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD9Q9P000 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD9Q9P000 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms