Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TFCP2L1Q9NZI6 MRPL3P1-201ENST00000400109 1033 ntBASIC24.34■■□□□ 1.49
TFCP2L1Q9NZI6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC24.34■■□□□ 1.49
TFCP2L1Q9NZI6 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC24.34■■□□□ 1.49
TFCP2L1Q9NZI6 AC120114.3-201ENST00000611923 658 ntBASIC24.34■■□□□ 1.49
TFCP2L1Q9NZI6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC24.34■■□□□ 1.49
TFCP2L1Q9NZI6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC24.34■■□□□ 1.49
TFCP2L1Q9NZI6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC24.34■■□□□ 1.49
TFCP2L1Q9NZI6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC24.34■■□□□ 1.49
TFCP2L1Q9NZI6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC24.34■■□□□ 1.49
TFCP2L1Q9NZI6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TFCP2L1Q9NZI6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TFCP2L1Q9NZI6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC24.33■■□□□ 1.49
TFCP2L1Q9NZI6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
TFCP2L1Q9NZI6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
TFCP2L1Q9NZI6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC24.33■■□□□ 1.49
TFCP2L1Q9NZI6 BMF-207ENST00000559701 630 ntTSL 3 BASIC24.33■■□□□ 1.49
TFCP2L1Q9NZI6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC24.33■■□□□ 1.49
TFCP2L1Q9NZI6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC24.33■■□□□ 1.49
TFCP2L1Q9NZI6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
TFCP2L1Q9NZI6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC24.33■■□□□ 1.49
TFCP2L1Q9NZI6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TFCP2L1Q9NZI6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TFCP2L1Q9NZI6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TFCP2L1Q9NZI6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.48
TFCP2L1Q9NZI6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC24.33■■□□□ 1.48
TFCP2L1Q9NZI6 FEM1AP1-201ENST00000431297 1995 ntBASIC24.33■■□□□ 1.48
TFCP2L1Q9NZI6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TFCP2L1Q9NZI6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TFCP2L1Q9NZI6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TFCP2L1Q9NZI6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TFCP2L1Q9NZI6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC24.32■■□□□ 1.48
TFCP2L1Q9NZI6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
TFCP2L1Q9NZI6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
TFCP2L1Q9NZI6 AC012615.1-201ENST00000565797 1299 ntBASIC24.32■■□□□ 1.48
TFCP2L1Q9NZI6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
TFCP2L1Q9NZI6 AC117500.6-201ENST00000624871 588 ntBASIC24.32■■□□□ 1.48
TFCP2L1Q9NZI6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TFCP2L1Q9NZI6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TFCP2L1Q9NZI6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC24.32■■□□□ 1.48
TFCP2L1Q9NZI6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TFCP2L1Q9NZI6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
TFCP2L1Q9NZI6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC24.31■■□□□ 1.48
TFCP2L1Q9NZI6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.31■■□□□ 1.48
TFCP2L1Q9NZI6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TFCP2L1Q9NZI6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TFCP2L1Q9NZI6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
TFCP2L1Q9NZI6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
TFCP2L1Q9NZI6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
TFCP2L1Q9NZI6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TFCP2L1Q9NZI6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC24.31■■□□□ 1.48
TFCP2L1Q9NZI6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
TFCP2L1Q9NZI6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
TFCP2L1Q9NZI6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC24.31■■□□□ 1.48
TFCP2L1Q9NZI6 AL121912.1-201ENST00000603683 238 ntBASIC24.31■■□□□ 1.48
TFCP2L1Q9NZI6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC24.31■■□□□ 1.48
TFCP2L1Q9NZI6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC24.31■■□□□ 1.48
TFCP2L1Q9NZI6 AC079602.3-201ENST00000623931 403 ntBASIC24.31■■□□□ 1.48
TFCP2L1Q9NZI6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TFCP2L1Q9NZI6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TFCP2L1Q9NZI6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TFCP2L1Q9NZI6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TFCP2L1Q9NZI6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TFCP2L1Q9NZI6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TFCP2L1Q9NZI6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC24.3■■□□□ 1.48
TFCP2L1Q9NZI6 AC079834.2-201ENST00000609776 1949 ntBASIC24.3■■□□□ 1.48
TFCP2L1Q9NZI6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
TFCP2L1Q9NZI6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC24.3■■□□□ 1.48
TFCP2L1Q9NZI6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC24.3■■□□□ 1.48
TFCP2L1Q9NZI6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC24.3■■□□□ 1.48
TFCP2L1Q9NZI6 TOB2P1-201ENST00000469761 992 ntBASIC24.3■■□□□ 1.48
TFCP2L1Q9NZI6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC24.3■■□□□ 1.48
TFCP2L1Q9NZI6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC24.3■■□□□ 1.48
TFCP2L1Q9NZI6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC24.3■■□□□ 1.48
TFCP2L1Q9NZI6 BX640515.1-201ENST00000617215 977 ntBASIC24.3■■□□□ 1.48
TFCP2L1Q9NZI6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TFCP2L1Q9NZI6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TFCP2L1Q9NZI6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
TFCP2L1Q9NZI6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TFCP2L1Q9NZI6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
TFCP2L1Q9NZI6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
TFCP2L1Q9NZI6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
TFCP2L1Q9NZI6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
TFCP2L1Q9NZI6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
TFCP2L1Q9NZI6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
TFCP2L1Q9NZI6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
TFCP2L1Q9NZI6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TFCP2L1Q9NZI6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TFCP2L1Q9NZI6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TFCP2L1Q9NZI6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC24.29■■□□□ 1.48
TFCP2L1Q9NZI6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
TFCP2L1Q9NZI6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC24.29■■□□□ 1.48
TFCP2L1Q9NZI6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TFCP2L1Q9NZI6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
TFCP2L1Q9NZI6 KRT18P13-201ENST00000400056 1290 ntBASIC24.29■■□□□ 1.48
TFCP2L1Q9NZI6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC24.29■■□□□ 1.48
TFCP2L1Q9NZI6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC24.29■■□□□ 1.48
TFCP2L1Q9NZI6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TFCP2L1Q9NZI6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC24.29■■□□□ 1.48
TFCP2L1Q9NZI6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms