Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KCNIP1Q9NZI2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 TUBB8P6-201ENST00000436895 1288 ntBASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 AL121829.2-201ENST00000620908 328 ntBASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KCNIP1Q9NZI2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 AC004408.2-201ENST00000623613 2777 ntBASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 AC141586.3-201ENST00000562166 1838 ntBASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 SOX15-203ENST00000570788 1093 ntBASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 AL020996.1-203ENST00000536896 2307 ntBASIC16.1■□□□□ 0.17
KCNIP1Q9NZI2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KCNIP1Q9NZI2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KCNIP1Q9NZI2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
KCNIP1Q9NZI2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
KCNIP1Q9NZI2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KCNIP1Q9NZI2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KCNIP1Q9NZI2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KCNIP1Q9NZI2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KCNIP1Q9NZI2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.09■□□□□ 0.17
KCNIP1Q9NZI2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
KCNIP1Q9NZI2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KCNIP1Q9NZI2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KCNIP1Q9NZI2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KCNIP1Q9NZI2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.09■□□□□ 0.17
KCNIP1Q9NZI2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KCNIP1Q9NZI2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KCNIP1Q9NZI2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.09■□□□□ 0.17
KCNIP1Q9NZI2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.09■□□□□ 0.17
KCNIP1Q9NZI2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.09■□□□□ 0.17
KCNIP1Q9NZI2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.09■□□□□ 0.17
KCNIP1Q9NZI2 AC008687.6-201ENST00000596318 630 ntBASIC16.09■□□□□ 0.17
KCNIP1Q9NZI2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.09■□□□□ 0.17
KCNIP1Q9NZI2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.09■□□□□ 0.17
KCNIP1Q9NZI2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KCNIP1Q9NZI2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.09■□□□□ 0.17
KCNIP1Q9NZI2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms