Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 MFSD11-216ENST00000590393 1141 ntBASIC18.58■□□□□ 0.56
NDE1Q9NXR1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
NDE1Q9NXR1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NDE1Q9NXR1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
NDE1Q9NXR1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NDE1Q9NXR1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
NDE1Q9NXR1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NDE1Q9NXR1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NDE1Q9NXR1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NDE1Q9NXR1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.58■□□□□ 0.56
NDE1Q9NXR1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NDE1Q9NXR1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NDE1Q9NXR1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDE1Q9NXR1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
NDE1Q9NXR1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.57■□□□□ 0.56
NDE1Q9NXR1 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDE1Q9NXR1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
NDE1Q9NXR1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDE1Q9NXR1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.57■□□□□ 0.56
NDE1Q9NXR1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.57■□□□□ 0.56
NDE1Q9NXR1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NDE1Q9NXR1 AC012313.1-201ENST00000593393 3059 ntBASIC18.57■□□□□ 0.56
NDE1Q9NXR1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.57■□□□□ 0.56
NDE1Q9NXR1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.57■□□□□ 0.56
NDE1Q9NXR1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.57■□□□□ 0.56
NDE1Q9NXR1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDE1Q9NXR1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.57■□□□□ 0.56
NDE1Q9NXR1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NDE1Q9NXR1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDE1Q9NXR1 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDE1Q9NXR1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDE1Q9NXR1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NDE1Q9NXR1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NDE1Q9NXR1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.57■□□□□ 0.56
NDE1Q9NXR1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDE1Q9NXR1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NDE1Q9NXR1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
NDE1Q9NXR1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDE1Q9NXR1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDE1Q9NXR1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NDE1Q9NXR1 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDE1Q9NXR1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.56■□□□□ 0.56
NDE1Q9NXR1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NDE1Q9NXR1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
NDE1Q9NXR1 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.56■□□□□ 0.56
NDE1Q9NXR1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDE1Q9NXR1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDE1Q9NXR1 AC023632.3-201ENST00000521633 145 ntBASIC18.56■□□□□ 0.56
NDE1Q9NXR1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.56■□□□□ 0.56
NDE1Q9NXR1 AC100791.3-201ENST00000617619 330 ntBASIC18.56■□□□□ 0.56
NDE1Q9NXR1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDE1Q9NXR1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.56■□□□□ 0.56
NDE1Q9NXR1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
NDE1Q9NXR1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.56■□□□□ 0.56
NDE1Q9NXR1 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
NDE1Q9NXR1 AC067852.2-201ENST00000590513 2313 ntBASIC18.56■□□□□ 0.56
NDE1Q9NXR1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.56■□□□□ 0.56
NDE1Q9NXR1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDE1Q9NXR1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NDE1Q9NXR1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.56■□□□□ 0.56
NDE1Q9NXR1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDE1Q9NXR1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDE1Q9NXR1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NDE1Q9NXR1 MKRN4P-201ENST00000444706 1521 ntBASIC18.55■□□□□ 0.56
NDE1Q9NXR1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.55■□□□□ 0.56
NDE1Q9NXR1 ZNF815P-204ENST00000434898 1737 ntBASIC18.55■□□□□ 0.56
NDE1Q9NXR1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDE1Q9NXR1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDE1Q9NXR1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NDE1Q9NXR1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NDE1Q9NXR1 MCRIP2P1-201ENST00000394346 511 ntBASIC18.55■□□□□ 0.56
NDE1Q9NXR1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.55■□□□□ 0.56
NDE1Q9NXR1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.55■□□□□ 0.56
NDE1Q9NXR1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NDE1Q9NXR1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NDE1Q9NXR1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NDE1Q9NXR1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDE1Q9NXR1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NDE1Q9NXR1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NDE1Q9NXR1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
NDE1Q9NXR1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NDE1Q9NXR1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.55■□□□□ 0.56
NDE1Q9NXR1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDE1Q9NXR1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NDE1Q9NXR1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NDE1Q9NXR1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDE1Q9NXR1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NDE1Q9NXR1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NDE1Q9NXR1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
NDE1Q9NXR1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDE1Q9NXR1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.54■□□□□ 0.56
NDE1Q9NXR1 AC139713.2-201ENST00000641328 2723 ntBASIC18.54■□□□□ 0.56
NDE1Q9NXR1 IRX1P1-201ENST00000438849 1838 ntBASIC18.54■□□□□ 0.56
NDE1Q9NXR1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NDE1Q9NXR1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDE1Q9NXR1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
NDE1Q9NXR1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
NDE1Q9NXR1 AL512353.2-201ENST00000448759 1962 ntBASIC18.54■□□□□ 0.56
NDE1Q9NXR1 FP475955.4-201ENST00000623131 1990 ntBASIC18.54■□□□□ 0.56
NDE1Q9NXR1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms