Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HPF1Q9NWY4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HPF1Q9NWY4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.8■□□□□ 0.44
HPF1Q9NWY4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HPF1Q9NWY4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.79■□□□□ 0.44
HPF1Q9NWY4 RCC2P6-201ENST00000526625 1557 ntBASIC17.79■□□□□ 0.44
HPF1Q9NWY4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPF1Q9NWY4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HPF1Q9NWY4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.79■□□□□ 0.44
HPF1Q9NWY4 MESTP1-201ENST00000404287 994 ntBASIC17.79■□□□□ 0.44
HPF1Q9NWY4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HPF1Q9NWY4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.79■□□□□ 0.44
HPF1Q9NWY4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
HPF1Q9NWY4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.79■□□□□ 0.44
HPF1Q9NWY4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.79■□□□□ 0.44
HPF1Q9NWY4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.79■□□□□ 0.44
HPF1Q9NWY4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPF1Q9NWY4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPF1Q9NWY4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPF1Q9NWY4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HPF1Q9NWY4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HPF1Q9NWY4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HPF1Q9NWY4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.79■□□□□ 0.44
HPF1Q9NWY4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.79■□□□□ 0.44
HPF1Q9NWY4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HPF1Q9NWY4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.79■□□□□ 0.44
HPF1Q9NWY4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HPF1Q9NWY4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPF1Q9NWY4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPF1Q9NWY4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPF1Q9NWY4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPF1Q9NWY4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPF1Q9NWY4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HPF1Q9NWY4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HPF1Q9NWY4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
HPF1Q9NWY4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPF1Q9NWY4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPF1Q9NWY4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPF1Q9NWY4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
HPF1Q9NWY4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HPF1Q9NWY4 AL390955.1-201ENST00000428694 934 ntBASIC17.78■□□□□ 0.44
HPF1Q9NWY4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.78■□□□□ 0.44
HPF1Q9NWY4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HPF1Q9NWY4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.78■□□□□ 0.44
HPF1Q9NWY4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPF1Q9NWY4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.78■□□□□ 0.44
HPF1Q9NWY4 FITM1-202ENST00000559294 800 ntBASIC17.78■□□□□ 0.44
HPF1Q9NWY4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.78■□□□□ 0.44
HPF1Q9NWY4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HPF1Q9NWY4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HPF1Q9NWY4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.78■□□□□ 0.44
HPF1Q9NWY4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPF1Q9NWY4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPF1Q9NWY4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.78■□□□□ 0.44
HPF1Q9NWY4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPF1Q9NWY4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPF1Q9NWY4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HPF1Q9NWY4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.77■□□□□ 0.44
HPF1Q9NWY4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HPF1Q9NWY4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
HPF1Q9NWY4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HPF1Q9NWY4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.77■□□□□ 0.44
HPF1Q9NWY4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HPF1Q9NWY4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.77■□□□□ 0.44
HPF1Q9NWY4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HPF1Q9NWY4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HPF1Q9NWY4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HPF1Q9NWY4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
HPF1Q9NWY4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
HPF1Q9NWY4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
HPF1Q9NWY4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
HPF1Q9NWY4 AC097488.1-201ENST00000507834 756 ntBASIC17.77■□□□□ 0.44
HPF1Q9NWY4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.77■□□□□ 0.44
HPF1Q9NWY4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.77■□□□□ 0.44
HPF1Q9NWY4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.77■□□□□ 0.44
HPF1Q9NWY4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.77■□□□□ 0.44
HPF1Q9NWY4 AC130371.2-201ENST00000619443 611 ntBASIC17.77■□□□□ 0.44
HPF1Q9NWY4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HPF1Q9NWY4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.77■□□□□ 0.44
HPF1Q9NWY4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.77■□□□□ 0.43
HPF1Q9NWY4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HPF1Q9NWY4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HPF1Q9NWY4 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.77■□□□□ 0.43
HPF1Q9NWY4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HPF1Q9NWY4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HPF1Q9NWY4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HPF1Q9NWY4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
HPF1Q9NWY4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HPF1Q9NWY4 LINC01465-201ENST00000408887 1940 ntBASIC17.76■□□□□ 0.43
HPF1Q9NWY4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HPF1Q9NWY4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.76■□□□□ 0.43
HPF1Q9NWY4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HPF1Q9NWY4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HPF1Q9NWY4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HPF1Q9NWY4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.76■□□□□ 0.43
HPF1Q9NWY4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HPF1Q9NWY4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HPF1Q9NWY4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HPF1Q9NWY4 FAM207BP-201ENST00000447172 505 ntBASIC17.76■□□□□ 0.43
HPF1Q9NWY4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms