Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42SE1Q9NRR8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 AL122018.1-201ENST00000446607 2310 ntBASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 AC011484.1-201ENST00000377652 1995 ntBASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42SE1Q9NRR8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 AC008741.2-201ENST00000612792 3115 ntBASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 AC121338.2-201ENST00000622535 1744 ntBASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42SE1Q9NRR8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms