Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 RARRES2P6-201ENST00000567333 442 ntBASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13.22□□□□□ -0.29
CDC42SE2Q9NRR3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 AL512353.2-201ENST00000448759 1962 ntBASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 AC135050.7-201ENST00000624508 2218 ntBASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 UBQLN4P1-201ENST00000461599 1801 ntBASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 AC124283.5-201ENST00000624661 1809 ntBASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 RPS2P52-201ENST00000469610 820 ntBASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 AL162430.1-201ENST00000480705 870 ntBASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 AC006557.6-201ENST00000623071 864 ntBASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CDC42SE2Q9NRR3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CDC42SE2Q9NRR3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
CDC42SE2Q9NRR3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.21□□□□□ -0.3
CDC42SE2Q9NRR3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.21□□□□□ -0.3
CDC42SE2Q9NRR3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CDC42SE2Q9NRR3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.21□□□□□ -0.3
CDC42SE2Q9NRR3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CDC42SE2Q9NRR3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.3
CDC42SE2Q9NRR3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CDC42SE2Q9NRR3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 FEM1AP3-201ENST00000403722 1741 ntBASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 OR2A1-AS1-201ENST00000462305 773 ntBASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 AC022517.1-201ENST00000592429 346 ntBASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 ANKRD20A6P-201ENST00000618763 204 ntBASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 AL121906.2-201ENST00000621597 723 ntBASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 AL390961.4-201ENST00000623958 2535 ntBASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 BCL2-203ENST00000589955 5011 ntBASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CDC42SE2Q9NRR3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms