Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.24■□□□□ 0.83
GDF3Q9NR23 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.24■□□□□ 0.83
GDF3Q9NR23 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
GDF3Q9NR23 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GDF3Q9NR23 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GDF3Q9NR23 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GDF3Q9NR23 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GDF3Q9NR23 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.24■□□□□ 0.83
GDF3Q9NR23 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GDF3Q9NR23 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GDF3Q9NR23 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GDF3Q9NR23 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.24■□□□□ 0.83
GDF3Q9NR23 WIZP1-201ENST00000531444 2299 ntBASIC20.24■□□□□ 0.83
GDF3Q9NR23 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
GDF3Q9NR23 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
GDF3Q9NR23 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDF3Q9NR23 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDF3Q9NR23 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
GDF3Q9NR23 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDF3Q9NR23 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDF3Q9NR23 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDF3Q9NR23 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.23■□□□□ 0.83
GDF3Q9NR23 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDF3Q9NR23 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDF3Q9NR23 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDF3Q9NR23 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.23■□□□□ 0.83
GDF3Q9NR23 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
GDF3Q9NR23 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
GDF3Q9NR23 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDF3Q9NR23 AC069544.1-201ENST00000609399 999 ntBASIC20.23■□□□□ 0.83
GDF3Q9NR23 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDF3Q9NR23 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.23■□□□□ 0.83
GDF3Q9NR23 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.23■□□□□ 0.83
GDF3Q9NR23 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDF3Q9NR23 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.23■□□□□ 0.83
GDF3Q9NR23 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.23■□□□□ 0.83
GDF3Q9NR23 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.23■□□□□ 0.83
GDF3Q9NR23 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GDF3Q9NR23 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.23■□□□□ 0.83
GDF3Q9NR23 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.23■□□□□ 0.83
GDF3Q9NR23 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDF3Q9NR23 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GDF3Q9NR23 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GDF3Q9NR23 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDF3Q9NR23 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.22■□□□□ 0.83
GDF3Q9NR23 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.22■□□□□ 0.83
GDF3Q9NR23 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDF3Q9NR23 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDF3Q9NR23 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDF3Q9NR23 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.22■□□□□ 0.83
GDF3Q9NR23 AC093525.10-201ENST00000625130 1569 ntBASIC20.22■□□□□ 0.83
GDF3Q9NR23 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDF3Q9NR23 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GDF3Q9NR23 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDF3Q9NR23 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDF3Q9NR23 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.22■□□□□ 0.83
GDF3Q9NR23 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDF3Q9NR23 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.22■□□□□ 0.83
GDF3Q9NR23 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDF3Q9NR23 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GDF3Q9NR23 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.22■□□□□ 0.83
GDF3Q9NR23 C2orf69P4-201ENST00000565394 541 ntBASIC20.22■□□□□ 0.83
GDF3Q9NR23 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.22■□□□□ 0.83
GDF3Q9NR23 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.22■□□□□ 0.83
GDF3Q9NR23 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDF3Q9NR23 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.22■□□□□ 0.83
GDF3Q9NR23 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDF3Q9NR23 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
GDF3Q9NR23 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDF3Q9NR23 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDF3Q9NR23 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
GDF3Q9NR23 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
GDF3Q9NR23 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GDF3Q9NR23 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GDF3Q9NR23 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GDF3Q9NR23 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GDF3Q9NR23 POM121L13P-201ENST00000422362 380 ntBASIC20.21■□□□□ 0.83
GDF3Q9NR23 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.21■□□□□ 0.83
GDF3Q9NR23 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.21■□□□□ 0.83
GDF3Q9NR23 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.21■□□□□ 0.83
GDF3Q9NR23 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GDF3Q9NR23 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.21■□□□□ 0.83
GDF3Q9NR23 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GDF3Q9NR23 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.21■□□□□ 0.83
GDF3Q9NR23 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GDF3Q9NR23 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
GDF3Q9NR23 BICD1-207ENST00000551848 1962 ntBASIC20.21■□□□□ 0.83
GDF3Q9NR23 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GDF3Q9NR23 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
GDF3Q9NR23 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
GDF3Q9NR23 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.2■□□□□ 0.82
GDF3Q9NR23 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
GDF3Q9NR23 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
GDF3Q9NR23 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GDF3Q9NR23 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
GDF3Q9NR23 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GDF3Q9NR23 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
GDF3Q9NR23 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
GDF3Q9NR23 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GDF3Q9NR23 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms