Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 AC068880.1-201ENST00000507289 2297 ntBASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 AL137784.2-201ENST00000607332 1000 ntBASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC52A3Q9NQ40 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 MIR663A-201ENST00000385250 93 ntBASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC52A3Q9NQ40 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 AC026185.1-201ENST00000445748 174 ntBASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 MYC-209ENST00000641252 345 ntBASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 PCDHB18P-201ENST00000524813 2368 ntBASIC18.16■□□□□ 0.5
SLC52A3Q9NQ40 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 TUBB8P6-201ENST00000436895 1288 ntBASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 GUSBP6-202ENST00000438529 1198 ntBASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 IKBKGP1-201ENST00000612193 1073 ntBASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 AC120498.8-201ENST00000614275 531 ntBASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 HLA-B-256ENST00000639848 1089 ntBASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms