Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
KCNMB3Q9NPA1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNMB3Q9NPA1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNMB3Q9NPA1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNMB3Q9NPA1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNMB3Q9NPA1 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNMB3Q9NPA1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNMB3Q9NPA1 CRYGFP-201ENST00000418459 633 ntBASIC21.57■■□□□ 1.04
KCNMB3Q9NPA1 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.57■■□□□ 1.04
KCNMB3Q9NPA1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.57■■□□□ 1.04
KCNMB3Q9NPA1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.57■■□□□ 1.04
KCNMB3Q9NPA1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNMB3Q9NPA1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNMB3Q9NPA1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNMB3Q9NPA1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.57■■□□□ 1.04
KCNMB3Q9NPA1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.57■■□□□ 1.04
KCNMB3Q9NPA1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
KCNMB3Q9NPA1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
KCNMB3Q9NPA1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KCNMB3Q9NPA1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNMB3Q9NPA1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.56■■□□□ 1.04
KCNMB3Q9NPA1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.56■■□□□ 1.04
KCNMB3Q9NPA1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNMB3Q9NPA1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNMB3Q9NPA1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNMB3Q9NPA1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KCNMB3Q9NPA1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNMB3Q9NPA1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.56■■□□□ 1.04
KCNMB3Q9NPA1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.56■■□□□ 1.04
KCNMB3Q9NPA1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNMB3Q9NPA1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KCNMB3Q9NPA1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.56■■□□□ 1.04
KCNMB3Q9NPA1 IRX1P1-201ENST00000438849 1838 ntBASIC21.56■■□□□ 1.04
KCNMB3Q9NPA1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.56■■□□□ 1.04
KCNMB3Q9NPA1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNMB3Q9NPA1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KCNMB3Q9NPA1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.56■■□□□ 1.04
KCNMB3Q9NPA1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
KCNMB3Q9NPA1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNMB3Q9NPA1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.55■■□□□ 1.04
KCNMB3Q9NPA1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
KCNMB3Q9NPA1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.55■■□□□ 1.04
KCNMB3Q9NPA1 MMP23A-201ENST00000234610 1017 ntBASIC21.55■■□□□ 1.04
KCNMB3Q9NPA1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
KCNMB3Q9NPA1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNMB3Q9NPA1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNMB3Q9NPA1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.55■■□□□ 1.04
KCNMB3Q9NPA1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNMB3Q9NPA1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.55■■□□□ 1.04
KCNMB3Q9NPA1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KCNMB3Q9NPA1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNMB3Q9NPA1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KCNMB3Q9NPA1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
KCNMB3Q9NPA1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNMB3Q9NPA1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.55■■□□□ 1.04
KCNMB3Q9NPA1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNMB3Q9NPA1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNMB3Q9NPA1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.55■■□□□ 1.04
KCNMB3Q9NPA1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.55■■□□□ 1.04
KCNMB3Q9NPA1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNMB3Q9NPA1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.55■■□□□ 1.04
KCNMB3Q9NPA1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNMB3Q9NPA1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNMB3Q9NPA1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNMB3Q9NPA1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.54■■□□□ 1.04
KCNMB3Q9NPA1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KCNMB3Q9NPA1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNMB3Q9NPA1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNMB3Q9NPA1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNMB3Q9NPA1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.54■■□□□ 1.04
KCNMB3Q9NPA1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KCNMB3Q9NPA1 AC073912.3-201ENST00000624414 853 ntBASIC21.54■■□□□ 1.04
KCNMB3Q9NPA1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KCNMB3Q9NPA1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.54■■□□□ 1.04
KCNMB3Q9NPA1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.54■■□□□ 1.04
KCNMB3Q9NPA1 FEM1AP3-201ENST00000403722 1741 ntBASIC21.54■■□□□ 1.04
KCNMB3Q9NPA1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNMB3Q9NPA1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNMB3Q9NPA1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.54■■□□□ 1.04
KCNMB3Q9NPA1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KCNMB3Q9NPA1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.53■■□□□ 1.04
KCNMB3Q9NPA1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.53■■□□□ 1.04
KCNMB3Q9NPA1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
KCNMB3Q9NPA1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KCNMB3Q9NPA1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNMB3Q9NPA1 CYP2D8P-201ENST00000433633 1490 ntBASIC21.53■■□□□ 1.04
KCNMB3Q9NPA1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
KCNMB3Q9NPA1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNMB3Q9NPA1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNMB3Q9NPA1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.53■■□□□ 1.04
KCNMB3Q9NPA1 AC087499.1-201ENST00000418141 1075 ntBASIC21.53■■□□□ 1.04
KCNMB3Q9NPA1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.53■■□□□ 1.04
KCNMB3Q9NPA1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
KCNMB3Q9NPA1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.53■■□□□ 1.04
KCNMB3Q9NPA1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNMB3Q9NPA1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNMB3Q9NPA1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
KCNMB3Q9NPA1 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.52■■□□□ 1.04
KCNMB3Q9NPA1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.52■■□□□ 1.04
KCNMB3Q9NPA1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms