Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMG20AQ9NP66 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMG20AQ9NP66 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMG20AQ9NP66 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMG20AQ9NP66 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMG20AQ9NP66 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HMG20AQ9NP66 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMG20AQ9NP66 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.4■□□□□ 0.38
HMG20AQ9NP66 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HMG20AQ9NP66 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.4■□□□□ 0.38
HMG20AQ9NP66 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HMG20AQ9NP66 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.4■□□□□ 0.38
HMG20AQ9NP66 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMG20AQ9NP66 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMG20AQ9NP66 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.4■□□□□ 0.38
HMG20AQ9NP66 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HMG20AQ9NP66 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMG20AQ9NP66 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMG20AQ9NP66 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMG20AQ9NP66 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.4■□□□□ 0.38
HMG20AQ9NP66 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HMG20AQ9NP66 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.38
HMG20AQ9NP66 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.39■□□□□ 0.38
HMG20AQ9NP66 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
HMG20AQ9NP66 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HMG20AQ9NP66 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.39■□□□□ 0.38
HMG20AQ9NP66 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 TNRC18P3-201ENST00000441896 2691 ntBASIC17.39■□□□□ 0.37
HMG20AQ9NP66 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 SIRPAP1-201ENST00000448467 1770 ntBASIC17.39■□□□□ 0.37
HMG20AQ9NP66 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 AC141586.5-201ENST00000624546 2050 ntBASIC17.39■□□□□ 0.37
HMG20AQ9NP66 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 AC093525.10-201ENST00000625130 1569 ntBASIC17.39■□□□□ 0.37
HMG20AQ9NP66 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMG20AQ9NP66 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 AC124067.4-201ENST00000519691 2379 ntBASIC17.38■□□□□ 0.37
HMG20AQ9NP66 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 KRT19P1-201ENST00000405746 1186 ntBASIC17.38■□□□□ 0.37
HMG20AQ9NP66 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 SLC7A5P1-201ENST00000568957 537 ntBASIC17.38■□□□□ 0.37
HMG20AQ9NP66 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 AC116050.2-201ENST00000612102 1779 ntBASIC17.38■□□□□ 0.37
HMG20AQ9NP66 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMG20AQ9NP66 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 ABALON-201ENST00000629058 1903 ntBASIC17.37■□□□□ 0.37
HMG20AQ9NP66 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HMG20AQ9NP66 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms