Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.79■□□□□ 0.44
UBQLN3Q9H347 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN3Q9H347 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
UBQLN3Q9H347 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 KRT17P2-201ENST00000300992 1314 ntBASIC17.78■□□□□ 0.44
UBQLN3Q9H347 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 AP002982.1-201ENST00000492365 877 ntBASIC17.78■□□□□ 0.44
UBQLN3Q9H347 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 CD177P1-201ENST00000606252 935 ntBASIC17.78■□□□□ 0.44
UBQLN3Q9H347 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN3Q9H347 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.77■□□□□ 0.44
UBQLN3Q9H347 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.77■□□□□ 0.44
UBQLN3Q9H347 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBQLN3Q9H347 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
UBQLN3Q9H347 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.77■□□□□ 0.44
UBQLN3Q9H347 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBQLN3Q9H347 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.77■□□□□ 0.44
UBQLN3Q9H347 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
UBQLN3Q9H347 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.77■□□□□ 0.44
UBQLN3Q9H347 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.77■□□□□ 0.44
UBQLN3Q9H347 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.77■□□□□ 0.44
UBQLN3Q9H347 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
UBQLN3Q9H347 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
UBQLN3Q9H347 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
UBQLN3Q9H347 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
UBQLN3Q9H347 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
UBQLN3Q9H347 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
UBQLN3Q9H347 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
UBQLN3Q9H347 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.77■□□□□ 0.43
UBQLN3Q9H347 AC120498.9-201ENST00000339021 3867 ntBASIC17.76■□□□□ 0.43
UBQLN3Q9H347 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN3Q9H347 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
UBQLN3Q9H347 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN3Q9H347 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.76■□□□□ 0.43
UBQLN3Q9H347 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN3Q9H347 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN3Q9H347 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
UBQLN3Q9H347 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
UBQLN3Q9H347 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN3Q9H347 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.76■□□□□ 0.43
UBQLN3Q9H347 FAM197Y1-201ENST00000421178 764 ntBASIC17.76■□□□□ 0.43
UBQLN3Q9H347 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN3Q9H347 KSR1P1-201ENST00000446298 240 ntBASIC17.76■□□□□ 0.43
UBQLN3Q9H347 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.76■□□□□ 0.43
UBQLN3Q9H347 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.76■□□□□ 0.43
UBQLN3Q9H347 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.76■□□□□ 0.43
UBQLN3Q9H347 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN3Q9H347 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN3Q9H347 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
UBQLN3Q9H347 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.76■□□□□ 0.43
UBQLN3Q9H347 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN3Q9H347 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN3Q9H347 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN3Q9H347 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.76■□□□□ 0.43
UBQLN3Q9H347 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
UBQLN3Q9H347 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.75■□□□□ 0.43
UBQLN3Q9H347 AC026471.5-201ENST00000615068 467 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms