Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
POLR2J3Q9H1A7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 PNMA6B-201ENST00000538162 1200 ntBASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 AC104417.2-201ENST00000562989 1793 ntBASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.73■□□□□ 0.43
POLR2J3Q9H1A7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 KRT18P16-201ENST00000510337 1294 ntBASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2J3Q9H1A7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 AC124283.5-201ENST00000624661 1809 ntBASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 AC120498.8-201ENST00000614275 531 ntBASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2J3Q9H1A7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms