Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
RNF38Q9H0F5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF38Q9H0F5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF38Q9H0F5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF38Q9H0F5 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF38Q9H0F5 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF38Q9H0F5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RNF38Q9H0F5 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF38Q9H0F5 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF38Q9H0F5 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF38Q9H0F5 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF38Q9H0F5 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF38Q9H0F5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF38Q9H0F5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF38Q9H0F5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF38Q9H0F5 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF38Q9H0F5 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RNF38Q9H0F5 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF38Q9H0F5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF38Q9H0F5 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF38Q9H0F5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.9■□□□□ 0.78
RNF38Q9H0F5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF38Q9H0F5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
RNF38Q9H0F5 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF38Q9H0F5 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF38Q9H0F5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF38Q9H0F5 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF38Q9H0F5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RNF38Q9H0F5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF38Q9H0F5 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF38Q9H0F5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF38Q9H0F5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF38Q9H0F5 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.89■□□□□ 0.77
RNF38Q9H0F5 AC117947.1-201ENST00000427448 529 ntBASIC19.89■□□□□ 0.77
RNF38Q9H0F5 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.89■□□□□ 0.77
RNF38Q9H0F5 WWOX-216ENST00000569818 525 ntBASIC19.89■□□□□ 0.77
RNF38Q9H0F5 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.89■□□□□ 0.77
RNF38Q9H0F5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.89■□□□□ 0.77
RNF38Q9H0F5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RNF38Q9H0F5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RNF38Q9H0F5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF38Q9H0F5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF38Q9H0F5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF38Q9H0F5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF38Q9H0F5 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF38Q9H0F5 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF38Q9H0F5 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF38Q9H0F5 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RNF38Q9H0F5 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF38Q9H0F5 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF38Q9H0F5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF38Q9H0F5 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF38Q9H0F5 TSPY23P-201ENST00000440136 739 ntBASIC19.88■□□□□ 0.77
RNF38Q9H0F5 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.88■□□□□ 0.77
RNF38Q9H0F5 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF38Q9H0F5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.88■□□□□ 0.77
RNF38Q9H0F5 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF38Q9H0F5 NTF6B-201ENST00000591913 560 ntBASIC19.88■□□□□ 0.77
RNF38Q9H0F5 AC139887.4-201ENST00000607877 719 ntBASIC19.88■□□□□ 0.77
RNF38Q9H0F5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF38Q9H0F5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RNF38Q9H0F5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF38Q9H0F5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF38Q9H0F5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RNF38Q9H0F5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF38Q9H0F5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF38Q9H0F5 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF38Q9H0F5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF38Q9H0F5 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RNF38Q9H0F5 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 AK4P3-201ENST00000418260 669 ntBASIC19.87■□□□□ 0.77
RNF38Q9H0F5 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF38Q9H0F5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF38Q9H0F5 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.86■□□□□ 0.77
RNF38Q9H0F5 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms