Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 BICD1-207ENST00000551848 1962 ntBASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 AL161938.1-201ENST00000569833 2180 ntBASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LCE3DQ9BYE3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 MIR600HG-201ENST00000449175 5984 ntBASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 NOC2LP1-202ENST00000452600 2235 ntBASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms