Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 AL031598.1-201ENST00000561511 1773 ntBASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
HDHD3Q9BSH5 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 AC005082.1-201ENST00000413042 2259 ntBASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 RAP2CP1-201ENST00000605103 478 ntBASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 AP006587.1-201ENST00000534129 1502 ntBASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HDHD3Q9BSH5 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HDHD3Q9BSH5 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HDHD3Q9BSH5 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HDHD3Q9BSH5 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HDHD3Q9BSH5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HDHD3Q9BSH5 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HDHD3Q9BSH5 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.18■□□□□ 0.18
HDHD3Q9BSH5 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HDHD3Q9BSH5 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HDHD3Q9BSH5 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HDHD3Q9BSH5 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HDHD3Q9BSH5 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.18■□□□□ 0.18
HDHD3Q9BSH5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.18■□□□□ 0.18
HDHD3Q9BSH5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.18■□□□□ 0.18
HDHD3Q9BSH5 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HDHD3Q9BSH5 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HDHD3Q9BSH5 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.18■□□□□ 0.18
HDHD3Q9BSH5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HDHD3Q9BSH5 KRT8P8-201ENST00000434750 1448 ntBASIC16.18■□□□□ 0.18
HDHD3Q9BSH5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.18■□□□□ 0.18
HDHD3Q9BSH5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.18■□□□□ 0.18
HDHD3Q9BSH5 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.18■□□□□ 0.18
HDHD3Q9BSH5 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HDHD3Q9BSH5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HDHD3Q9BSH5 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.18■□□□□ 0.18
HDHD3Q9BSH5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 AC091874.3-201ENST00000512672 1195 ntBASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms