Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EBF4Q9BQW3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EBF4Q9BQW3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EBF4Q9BQW3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.71■□□□□ 0.59
EBF4Q9BQW3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.71■□□□□ 0.59
EBF4Q9BQW3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EBF4Q9BQW3 AC137761.2-201ENST00000561729 223 ntBASIC18.71■□□□□ 0.59
EBF4Q9BQW3 AC145350.3-201ENST00000569033 163 ntBASIC18.71■□□□□ 0.59
EBF4Q9BQW3 BID-214ENST00000617586 542 ntTSL 5 BASIC18.71■□□□□ 0.59
EBF4Q9BQW3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.71■□□□□ 0.59
EBF4Q9BQW3 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.71■□□□□ 0.59
EBF4Q9BQW3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
EBF4Q9BQW3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EBF4Q9BQW3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.71■□□□□ 0.59
EBF4Q9BQW3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EBF4Q9BQW3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EBF4Q9BQW3 ANO7L1-203ENST00000602586 1720 ntBASIC18.71■□□□□ 0.59
EBF4Q9BQW3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.71■□□□□ 0.59
EBF4Q9BQW3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EBF4Q9BQW3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EBF4Q9BQW3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.7■□□□□ 0.58
EBF4Q9BQW3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EBF4Q9BQW3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
EBF4Q9BQW3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
EBF4Q9BQW3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EBF4Q9BQW3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EBF4Q9BQW3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EBF4Q9BQW3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
EBF4Q9BQW3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
EBF4Q9BQW3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EBF4Q9BQW3 GPX1P1-201ENST00000388829 606 ntBASIC18.69■□□□□ 0.58
EBF4Q9BQW3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
EBF4Q9BQW3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.69■□□□□ 0.58
EBF4Q9BQW3 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.69■□□□□ 0.58
EBF4Q9BQW3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
EBF4Q9BQW3 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.69■□□□□ 0.58
EBF4Q9BQW3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.69■□□□□ 0.58
EBF4Q9BQW3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
EBF4Q9BQW3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.69■□□□□ 0.58
EBF4Q9BQW3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EBF4Q9BQW3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.69■□□□□ 0.58
EBF4Q9BQW3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.69■□□□□ 0.58
EBF4Q9BQW3 AC008694.1-202ENST00000636953 945 ntBASIC18.69■□□□□ 0.58
EBF4Q9BQW3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EBF4Q9BQW3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EBF4Q9BQW3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EBF4Q9BQW3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.69■□□□□ 0.58
EBF4Q9BQW3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EBF4Q9BQW3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.69■□□□□ 0.58
EBF4Q9BQW3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
EBF4Q9BQW3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms