Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 AC034232.1-201ENST00000506026 1064 ntBASIC20.6■□□□□ 0.89
YME1L1Q96TA2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.6■□□□□ 0.89
YME1L1Q96TA2 MIR3652-201ENST00000579335 131 ntBASIC20.6■□□□□ 0.89
YME1L1Q96TA2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.6■□□□□ 0.89
YME1L1Q96TA2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
YME1L1Q96TA2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
YME1L1Q96TA2 NPAP1P7-201ENST00000613027 823 ntBASIC20.6■□□□□ 0.89
YME1L1Q96TA2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
YME1L1Q96TA2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
YME1L1Q96TA2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
YME1L1Q96TA2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.6■□□□□ 0.89
YME1L1Q96TA2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
YME1L1Q96TA2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
YME1L1Q96TA2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
YME1L1Q96TA2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
YME1L1Q96TA2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.59■□□□□ 0.89
YME1L1Q96TA2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
YME1L1Q96TA2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
YME1L1Q96TA2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
YME1L1Q96TA2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
YME1L1Q96TA2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
YME1L1Q96TA2 HBZP1-201ENST00000354915 429 ntBASIC20.59■□□□□ 0.89
YME1L1Q96TA2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
YME1L1Q96TA2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
YME1L1Q96TA2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.59■□□□□ 0.89
YME1L1Q96TA2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.59■□□□□ 0.89
YME1L1Q96TA2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.59■□□□□ 0.89
YME1L1Q96TA2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
YME1L1Q96TA2 CR769767.2-201ENST00000622735 460 ntBASIC20.59■□□□□ 0.89
YME1L1Q96TA2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.59■□□□□ 0.89
YME1L1Q96TA2 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.59■□□□□ 0.89
YME1L1Q96TA2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.59■□□□□ 0.89
YME1L1Q96TA2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
YME1L1Q96TA2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
YME1L1Q96TA2 AC020907.5-201ENST00000624372 1936 ntBASIC20.59■□□□□ 0.89
YME1L1Q96TA2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.58■□□□□ 0.89
YME1L1Q96TA2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
YME1L1Q96TA2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
YME1L1Q96TA2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
YME1L1Q96TA2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
YME1L1Q96TA2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
YME1L1Q96TA2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
YME1L1Q96TA2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
YME1L1Q96TA2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
YME1L1Q96TA2 TSPY21P-201ENST00000433481 731 ntBASIC20.58■□□□□ 0.89
YME1L1Q96TA2 TSPY23P-201ENST00000440136 739 ntBASIC20.58■□□□□ 0.89
YME1L1Q96TA2 AC092329.2-201ENST00000598402 547 ntBASIC20.58■□□□□ 0.89
YME1L1Q96TA2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
YME1L1Q96TA2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
YME1L1Q96TA2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
YME1L1Q96TA2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.58■□□□□ 0.88
YME1L1Q96TA2 AC009237.14-201ENST00000609975 1594 ntBASIC20.58■□□□□ 0.88
YME1L1Q96TA2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
YME1L1Q96TA2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
YME1L1Q96TA2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
YME1L1Q96TA2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
YME1L1Q96TA2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
YME1L1Q96TA2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
YME1L1Q96TA2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
YME1L1Q96TA2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 RASA4DP-201ENST00000460726 1199 ntBASIC20.57■□□□□ 0.88
YME1L1Q96TA2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.57■□□□□ 0.88
YME1L1Q96TA2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.56■□□□□ 0.88
YME1L1Q96TA2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
YME1L1Q96TA2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
YME1L1Q96TA2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
YME1L1Q96TA2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
YME1L1Q96TA2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
YME1L1Q96TA2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
YME1L1Q96TA2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.56■□□□□ 0.88
YME1L1Q96TA2 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.56■□□□□ 0.88
YME1L1Q96TA2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
YME1L1Q96TA2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms