Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD1Q96RS6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 UBE2SP1-201ENST00000450587 669 ntBASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUDCD1Q96RS6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUDCD1Q96RS6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.79■□□□□ 0.76
NUDCD1Q96RS6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUDCD1Q96RS6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUDCD1Q96RS6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUDCD1Q96RS6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUDCD1Q96RS6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.79■□□□□ 0.76
NUDCD1Q96RS6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUDCD1Q96RS6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUDCD1Q96RS6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NUDCD1Q96RS6 KRT8P8-201ENST00000434750 1448 ntBASIC19.79■□□□□ 0.76
NUDCD1Q96RS6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NUDCD1Q96RS6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUDCD1Q96RS6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
NUDCD1Q96RS6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NUDCD1Q96RS6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUDCD1Q96RS6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
NUDCD1Q96RS6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUDCD1Q96RS6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUDCD1Q96RS6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUDCD1Q96RS6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUDCD1Q96RS6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms