Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SYNGAP1Q96PV0 PCED1CP-201ENST00000419887 785 ntBASIC21.81■■□□□ 1.08
SYNGAP1Q96PV0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYNGAP1Q96PV0 PRSS44-201ENST00000515154 1146 ntBASIC21.81■■□□□ 1.08
SYNGAP1Q96PV0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SYNGAP1Q96PV0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.81■■□□□ 1.08
SYNGAP1Q96PV0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.81■■□□□ 1.08
SYNGAP1Q96PV0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SYNGAP1Q96PV0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SYNGAP1Q96PV0 AC140113.3-201ENST00000605663 199 ntBASIC21.81■■□□□ 1.08
SYNGAP1Q96PV0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
SYNGAP1Q96PV0 AL023973.1-201ENST00000624619 620 ntBASIC21.81■■□□□ 1.08
SYNGAP1Q96PV0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYNGAP1Q96PV0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYNGAP1Q96PV0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SYNGAP1Q96PV0 TCF3P1-201ENST00000423021 1937 ntBASIC21.81■■□□□ 1.08
SYNGAP1Q96PV0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYNGAP1Q96PV0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.81■■□□□ 1.08
SYNGAP1Q96PV0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYNGAP1Q96PV0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.81■■□□□ 1.08
SYNGAP1Q96PV0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYNGAP1Q96PV0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 AL671277.2-201ENST00000458060 996 ntBASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 AL359075.1-203ENST00000462729 1002 ntBASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
SYNGAP1Q96PV0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 KRT8P45-201ENST00000414328 1447 ntBASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 AP000523.1-201ENST00000398242 1049 ntBASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.79■■□□□ 1.08
SYNGAP1Q96PV0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SYNGAP1Q96PV0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYNGAP1Q96PV0 KRT8P11-201ENST00000409686 1436 ntBASIC21.78■■□□□ 1.08
SYNGAP1Q96PV0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYNGAP1Q96PV0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.78■■□□□ 1.08
SYNGAP1Q96PV0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SYNGAP1Q96PV0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.78■■□□□ 1.08
SYNGAP1Q96PV0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYNGAP1Q96PV0 IER3-202ENST00000376377 1350 ntBASIC21.78■■□□□ 1.08
SYNGAP1Q96PV0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYNGAP1Q96PV0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.78■■□□□ 1.08
SYNGAP1Q96PV0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYNGAP1Q96PV0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SYNGAP1Q96PV0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SYNGAP1Q96PV0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SYNGAP1Q96PV0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SYNGAP1Q96PV0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYNGAP1Q96PV0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SYNGAP1Q96PV0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SYNGAP1Q96PV0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.78■■□□□ 1.08
SYNGAP1Q96PV0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.78■■□□□ 1.08
SYNGAP1Q96PV0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.78■■□□□ 1.08
SYNGAP1Q96PV0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYNGAP1Q96PV0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.78■■□□□ 1.08
SYNGAP1Q96PV0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms