Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CASD1Q96PB1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CASD1Q96PB1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CASD1Q96PB1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CASD1Q96PB1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
CASD1Q96PB1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CASD1Q96PB1 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.49■□□□□ 0.87
CASD1Q96PB1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
CASD1Q96PB1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CASD1Q96PB1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CASD1Q96PB1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CASD1Q96PB1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.49■□□□□ 0.87
CASD1Q96PB1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.49■□□□□ 0.87
CASD1Q96PB1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CASD1Q96PB1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.49■□□□□ 0.87
CASD1Q96PB1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.49■□□□□ 0.87
CASD1Q96PB1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.49■□□□□ 0.87
CASD1Q96PB1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CASD1Q96PB1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CASD1Q96PB1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.49■□□□□ 0.87
CASD1Q96PB1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CASD1Q96PB1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.49■□□□□ 0.87
CASD1Q96PB1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
CASD1Q96PB1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CASD1Q96PB1 LINC01006-201ENST00000333319 2292 ntBASIC20.48■□□□□ 0.87
CASD1Q96PB1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CASD1Q96PB1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CASD1Q96PB1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CASD1Q96PB1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CASD1Q96PB1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CASD1Q96PB1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CASD1Q96PB1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CASD1Q96PB1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CASD1Q96PB1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CASD1Q96PB1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CASD1Q96PB1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CASD1Q96PB1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CASD1Q96PB1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.48■□□□□ 0.87
CASD1Q96PB1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.48■□□□□ 0.87
CASD1Q96PB1 SPDYE13P-201ENST00000445314 798 ntBASIC20.48■□□□□ 0.87
CASD1Q96PB1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.48■□□□□ 0.87
CASD1Q96PB1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.48■□□□□ 0.87
CASD1Q96PB1 AC069148.1-201ENST00000608741 768 ntBASIC20.48■□□□□ 0.87
CASD1Q96PB1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CASD1Q96PB1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
CASD1Q96PB1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.48■□□□□ 0.87
CASD1Q96PB1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CASD1Q96PB1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.48■□□□□ 0.87
CASD1Q96PB1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
CASD1Q96PB1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CASD1Q96PB1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CASD1Q96PB1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CASD1Q96PB1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CASD1Q96PB1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.47■□□□□ 0.87
CASD1Q96PB1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CASD1Q96PB1 DUSP5P1-201ENST00000441325 1139 ntBASIC20.47■□□□□ 0.87
CASD1Q96PB1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.47■□□□□ 0.87
CASD1Q96PB1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.47■□□□□ 0.87
CASD1Q96PB1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.47■□□□□ 0.87
CASD1Q96PB1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CASD1Q96PB1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.47■□□□□ 0.87
CASD1Q96PB1 GPAT2P1-201ENST00000444924 1672 ntBASIC20.47■□□□□ 0.87
CASD1Q96PB1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.47■□□□□ 0.87
CASD1Q96PB1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CASD1Q96PB1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CASD1Q96PB1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CASD1Q96PB1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.46■□□□□ 0.87
CASD1Q96PB1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CASD1Q96PB1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CASD1Q96PB1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CASD1Q96PB1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CASD1Q96PB1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CASD1Q96PB1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CASD1Q96PB1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CASD1Q96PB1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CASD1Q96PB1 HCG4P8-203ENST00000443049 980 ntBASIC20.46■□□□□ 0.87
CASD1Q96PB1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CASD1Q96PB1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.46■□□□□ 0.87
CASD1Q96PB1 AL121894.2-201ENST00000602977 491 ntBASIC20.46■□□□□ 0.87
CASD1Q96PB1 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.46■□□□□ 0.87
CASD1Q96PB1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.46■□□□□ 0.87
CASD1Q96PB1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CASD1Q96PB1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CASD1Q96PB1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.46■□□□□ 0.87
CASD1Q96PB1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CASD1Q96PB1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CASD1Q96PB1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CASD1Q96PB1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CASD1Q96PB1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CASD1Q96PB1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.46■□□□□ 0.87
CASD1Q96PB1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CASD1Q96PB1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.45■□□□□ 0.86
CASD1Q96PB1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CASD1Q96PB1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CASD1Q96PB1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CASD1Q96PB1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CASD1Q96PB1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CASD1Q96PB1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CASD1Q96PB1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
CASD1Q96PB1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms