Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT9Q92600 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.69■□□□□ 0.42
CNOT9Q92600 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT9Q92600 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CNOT9Q92600 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CNOT9Q92600 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
CNOT9Q92600 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CNOT9Q92600 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CNOT9Q92600 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.68■□□□□ 0.42
CNOT9Q92600 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.68■□□□□ 0.42
CNOT9Q92600 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.68■□□□□ 0.42
CNOT9Q92600 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CNOT9Q92600 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT9Q92600 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT9Q92600 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT9Q92600 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT9Q92600 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT9Q92600 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT9Q92600 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT9Q92600 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT9Q92600 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.68■□□□□ 0.42
CNOT9Q92600 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.68■□□□□ 0.42
CNOT9Q92600 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT9Q92600 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT9Q92600 RN7SL471P-201ENST00000580476 299 ntBASIC17.68■□□□□ 0.42
CNOT9Q92600 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.68■□□□□ 0.42
CNOT9Q92600 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT9Q92600 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CNOT9Q92600 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT9Q92600 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.68■□□□□ 0.42
CNOT9Q92600 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT9Q92600 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.67■□□□□ 0.42
CNOT9Q92600 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT9Q92600 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT9Q92600 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT9Q92600 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT9Q92600 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT9Q92600 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT9Q92600 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CNOT9Q92600 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT9Q92600 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.67■□□□□ 0.42
CNOT9Q92600 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CNOT9Q92600 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT9Q92600 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.67■□□□□ 0.42
CNOT9Q92600 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.67■□□□□ 0.42
CNOT9Q92600 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.67■□□□□ 0.42
CNOT9Q92600 AC128676.1-201ENST00000454392 318 ntBASIC17.67■□□□□ 0.42
CNOT9Q92600 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT9Q92600 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT9Q92600 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.67■□□□□ 0.42
CNOT9Q92600 AC124016.1-201ENST00000609552 612 ntBASIC17.67■□□□□ 0.42
CNOT9Q92600 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.67■□□□□ 0.42
CNOT9Q92600 HLA-A-209ENST00000638375 975 ntBASIC17.67■□□□□ 0.42
CNOT9Q92600 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT9Q92600 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CNOT9Q92600 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT9Q92600 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.67■□□□□ 0.42
CNOT9Q92600 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.67■□□□□ 0.42
CNOT9Q92600 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT9Q92600 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT9Q92600 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNOT9Q92600 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT9Q92600 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.66■□□□□ 0.42
CNOT9Q92600 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT9Q92600 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
CNOT9Q92600 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT9Q92600 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT9Q92600 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.66■□□□□ 0.42
CNOT9Q92600 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.66■□□□□ 0.42
CNOT9Q92600 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.66■□□□□ 0.42
CNOT9Q92600 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT9Q92600 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT9Q92600 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.66■□□□□ 0.42
CNOT9Q92600 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT9Q92600 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT9Q92600 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT9Q92600 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.66■□□□□ 0.42
CNOT9Q92600 POU5F1P3-201ENST00000428824 1078 ntBASIC17.66■□□□□ 0.42
CNOT9Q92600 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CNOT9Q92600 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.66■□□□□ 0.42
CNOT9Q92600 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT9Q92600 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CNOT9Q92600 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT9Q92600 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.66■□□□□ 0.42
CNOT9Q92600 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.66■□□□□ 0.42
CNOT9Q92600 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT9Q92600 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CNOT9Q92600 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CNOT9Q92600 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.66■□□□□ 0.42
CNOT9Q92600 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.66■□□□□ 0.42
CNOT9Q92600 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CNOT9Q92600 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CNOT9Q92600 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CNOT9Q92600 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.65■□□□□ 0.42
CNOT9Q92600 AC004408.2-201ENST00000623613 2777 ntBASIC17.65■□□□□ 0.42
CNOT9Q92600 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.65■□□□□ 0.42
CNOT9Q92600 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CNOT9Q92600 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.65■□□□□ 0.42
CNOT9Q92600 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.65■□□□□ 0.42
CNOT9Q92600 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms