Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHF3Q92576 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.3■□□□□ 0.36
PHF3Q92576 TREX1-205ENST00000625293 1783 ntBASIC17.3■□□□□ 0.36
PHF3Q92576 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHF3Q92576 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHF3Q92576 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHF3Q92576 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHF3Q92576 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PHF3Q92576 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PHF3Q92576 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHF3Q92576 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PHF3Q92576 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHF3Q92576 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PHF3Q92576 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.3■□□□□ 0.36
PHF3Q92576 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.3■□□□□ 0.36
PHF3Q92576 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PHF3Q92576 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHF3Q92576 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHF3Q92576 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.3■□□□□ 0.36
PHF3Q92576 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.3■□□□□ 0.36
PHF3Q92576 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.3■□□□□ 0.36
PHF3Q92576 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PHF3Q92576 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHF3Q92576 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHF3Q92576 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHF3Q92576 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHF3Q92576 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.29■□□□□ 0.36
PHF3Q92576 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHF3Q92576 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.29■□□□□ 0.36
PHF3Q92576 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHF3Q92576 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
PHF3Q92576 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PHF3Q92576 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHF3Q92576 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHF3Q92576 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.29■□□□□ 0.36
PHF3Q92576 Z85996.1-201ENST00000494644 937 ntBASIC17.29■□□□□ 0.36
PHF3Q92576 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHF3Q92576 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHF3Q92576 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.29■□□□□ 0.36
PHF3Q92576 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.29■□□□□ 0.36
PHF3Q92576 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHF3Q92576 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.29■□□□□ 0.36
PHF3Q92576 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHF3Q92576 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.29■□□□□ 0.36
PHF3Q92576 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHF3Q92576 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.29■□□□□ 0.36
PHF3Q92576 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHF3Q92576 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.28■□□□□ 0.36
PHF3Q92576 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.28■□□□□ 0.36
PHF3Q92576 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHF3Q92576 ARMC10P1-201ENST00000313754 855 ntBASIC17.28■□□□□ 0.36
PHF3Q92576 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PHF3Q92576 MFAP1P1-201ENST00000442257 1255 ntBASIC17.28■□□□□ 0.36
PHF3Q92576 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PHF3Q92576 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHF3Q92576 AP000692.2-201ENST00000608391 879 ntBASIC17.28■□□□□ 0.36
PHF3Q92576 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.28■□□□□ 0.36
PHF3Q92576 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHF3Q92576 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.28■□□□□ 0.36
PHF3Q92576 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHF3Q92576 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHF3Q92576 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PHF3Q92576 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PHF3Q92576 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHF3Q92576 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
PHF3Q92576 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHF3Q92576 AC093484.2-201ENST00000580996 2166 ntBASIC17.28■□□□□ 0.36
PHF3Q92576 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHF3Q92576 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHF3Q92576 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.28■□□□□ 0.36
PHF3Q92576 AL137013.1-201ENST00000432946 1228 ntBASIC17.28■□□□□ 0.36
PHF3Q92576 AC104076.2-201ENST00000448912 469 ntBASIC17.28■□□□□ 0.36
PHF3Q92576 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.28■□□□□ 0.36
PHF3Q92576 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.28■□□□□ 0.36
PHF3Q92576 SLC25A1P4-201ENST00000567977 778 ntBASIC17.28■□□□□ 0.36
PHF3Q92576 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.28■□□□□ 0.36
PHF3Q92576 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PHF3Q92576 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHF3Q92576 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PHF3Q92576 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PHF3Q92576 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.28■□□□□ 0.36
PHF3Q92576 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PHF3Q92576 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.28■□□□□ 0.36
PHF3Q92576 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
PHF3Q92576 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHF3Q92576 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PHF3Q92576 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PHF3Q92576 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.27■□□□□ 0.36
PHF3Q92576 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHF3Q92576 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.27■□□□□ 0.36
PHF3Q92576 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.27■□□□□ 0.36
PHF3Q92576 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
PHF3Q92576 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.27■□□□□ 0.36
PHF3Q92576 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PHF3Q92576 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHF3Q92576 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.27■□□□□ 0.36
PHF3Q92576 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.27■□□□□ 0.36
PHF3Q92576 AC011298.2-201ENST00000617989 482 ntBASIC17.27■□□□□ 0.36
PHF3Q92576 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
PHF3Q92576 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms