Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 HCG4P8-203ENST00000443049 980 ntBASIC19.24■□□□□ 0.67
HMGB4Q8WW32 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 AC116407.4-201ENST00000623319 1061 ntBASIC19.24■□□□□ 0.67
HMGB4Q8WW32 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HMGB4Q8WW32 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGB4Q8WW32 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HMGB4Q8WW32 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
HMGB4Q8WW32 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGB4Q8WW32 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
HMGB4Q8WW32 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.23■□□□□ 0.67
HMGB4Q8WW32 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.23■□□□□ 0.67
HMGB4Q8WW32 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.23■□□□□ 0.67
HMGB4Q8WW32 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGB4Q8WW32 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.23■□□□□ 0.67
HMGB4Q8WW32 GCSHP2-201ENST00000560971 527 ntBASIC19.23■□□□□ 0.67
HMGB4Q8WW32 AC069148.1-201ENST00000608741 768 ntBASIC19.23■□□□□ 0.67
HMGB4Q8WW32 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HMGB4Q8WW32 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGB4Q8WW32 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGB4Q8WW32 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HMGB4Q8WW32 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HMGB4Q8WW32 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
HMGB4Q8WW32 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGB4Q8WW32 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HMGB4Q8WW32 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HMGB4Q8WW32 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HMGB4Q8WW32 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.22■□□□□ 0.67
HMGB4Q8WW32 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.22■□□□□ 0.67
HMGB4Q8WW32 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGB4Q8WW32 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGB4Q8WW32 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGB4Q8WW32 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGB4Q8WW32 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMGB4Q8WW32 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.22■□□□□ 0.67
HMGB4Q8WW32 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGB4Q8WW32 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGB4Q8WW32 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMGB4Q8WW32 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.22■□□□□ 0.67
HMGB4Q8WW32 NEK4P2-201ENST00000580004 1012 ntBASIC19.22■□□□□ 0.67
HMGB4Q8WW32 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.22■□□□□ 0.67
HMGB4Q8WW32 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGB4Q8WW32 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
HMGB4Q8WW32 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGB4Q8WW32 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMGB4Q8WW32 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGB4Q8WW32 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
HMGB4Q8WW32 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMGB4Q8WW32 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.22■□□□□ 0.67
HMGB4Q8WW32 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGB4Q8WW32 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HMGB4Q8WW32 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HMGB4Q8WW32 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HMGB4Q8WW32 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HMGB4Q8WW32 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HMGB4Q8WW32 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
HMGB4Q8WW32 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.21■□□□□ 0.67
HMGB4Q8WW32 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.21■□□□□ 0.67
HMGB4Q8WW32 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.21■□□□□ 0.67
HMGB4Q8WW32 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.21■□□□□ 0.67
HMGB4Q8WW32 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.21■□□□□ 0.67
HMGB4Q8WW32 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HMGB4Q8WW32 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.21■□□□□ 0.67
HMGB4Q8WW32 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGB4Q8WW32 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGB4Q8WW32 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HMGB4Q8WW32 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGB4Q8WW32 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.21■□□□□ 0.67
HMGB4Q8WW32 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.21■□□□□ 0.66
HMGB4Q8WW32 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGB4Q8WW32 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
HMGB4Q8WW32 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HMGB4Q8WW32 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
HMGB4Q8WW32 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HMGB4Q8WW32 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.2■□□□□ 0.66
HMGB4Q8WW32 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HMGB4Q8WW32 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HMGB4Q8WW32 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.2■□□□□ 0.66
HMGB4Q8WW32 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.2■□□□□ 0.66
HMGB4Q8WW32 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.2■□□□□ 0.66
HMGB4Q8WW32 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.2■□□□□ 0.66
HMGB4Q8WW32 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.2■□□□□ 0.66
HMGB4Q8WW32 ZNF444P1-201ENST00000559497 298 ntBASIC19.2■□□□□ 0.66
HMGB4Q8WW32 AL136038.3-201ENST00000561909 1096 ntBASIC19.2■□□□□ 0.66
HMGB4Q8WW32 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms