Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCHCR1Q8TD31 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CCHCR1Q8TD31 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCHCR1Q8TD31 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CCHCR1Q8TD31 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.97■□□□□ 0.79
CCHCR1Q8TD31 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCHCR1Q8TD31 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCHCR1Q8TD31 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
CCHCR1Q8TD31 AC026366.1-201ENST00000488803 879 ntBASIC19.97■□□□□ 0.79
CCHCR1Q8TD31 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.97■□□□□ 0.79
CCHCR1Q8TD31 AC008687.6-201ENST00000596318 630 ntBASIC19.97■□□□□ 0.79
CCHCR1Q8TD31 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCHCR1Q8TD31 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCHCR1Q8TD31 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
CCHCR1Q8TD31 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.97■□□□□ 0.79
CCHCR1Q8TD31 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCHCR1Q8TD31 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.97■□□□□ 0.79
CCHCR1Q8TD31 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCHCR1Q8TD31 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CCHCR1Q8TD31 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CCHCR1Q8TD31 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 ESRRAP1-201ENST00000400596 1257 ntBASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
CCHCR1Q8TD31 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 FAM201B-201ENST00000458407 597 ntBASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 AC120498.8-201ENST00000614275 531 ntBASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCHCR1Q8TD31 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 KRT17P3-201ENST00000420566 1262 ntBASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.94■□□□□ 0.78
CCHCR1Q8TD31 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms