Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 LBX2-AS1-202ENST00000603175 2083 ntBASIC30.07■■■□□ 2.4
CFAP43Q8NDM7 LINC01521-201ENST00000504184 1943 ntBASIC30.07■■■□□ 2.4
CFAP43Q8NDM7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CFAP43Q8NDM7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
CFAP43Q8NDM7 MIR3180-1-201ENST00000580374 94 ntBASIC30.07■■■□□ 2.4
CFAP43Q8NDM7 MIR3180-3-201ENST00000584616 94 ntBASIC30.07■■■□□ 2.4
CFAP43Q8NDM7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
CFAP43Q8NDM7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CFAP43Q8NDM7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CFAP43Q8NDM7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CFAP43Q8NDM7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CFAP43Q8NDM7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CFAP43Q8NDM7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
CFAP43Q8NDM7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC30.05■■■□□ 2.4
CFAP43Q8NDM7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CFAP43Q8NDM7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CFAP43Q8NDM7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CFAP43Q8NDM7 AL022342.1-201ENST00000400363 863 ntBASIC30.05■■■□□ 2.4
CFAP43Q8NDM7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC30.05■■■□□ 2.4
CFAP43Q8NDM7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC30.05■■■□□ 2.4
CFAP43Q8NDM7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC30.05■■■□□ 2.4
CFAP43Q8NDM7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC30.05■■■□□ 2.4
CFAP43Q8NDM7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC30.05■■■□□ 2.4
CFAP43Q8NDM7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
CFAP43Q8NDM7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC30.05■■■□□ 2.4
CFAP43Q8NDM7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
CFAP43Q8NDM7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC30.05■■■□□ 2.4
CFAP43Q8NDM7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC30.05■■■□□ 2.4
CFAP43Q8NDM7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 AL031008.1-201ENST00000619963 541 ntBASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 AC140113.3-201ENST00000605663 199 ntBASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
CFAP43Q8NDM7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CFAP43Q8NDM7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
CFAP43Q8NDM7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
CFAP43Q8NDM7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC30.03■■■□□ 2.4
CFAP43Q8NDM7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC30.03■■■□□ 2.4
CFAP43Q8NDM7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CFAP43Q8NDM7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CFAP43Q8NDM7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CFAP43Q8NDM7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CFAP43Q8NDM7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
CFAP43Q8NDM7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CFAP43Q8NDM7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC30.03■■■□□ 2.4
CFAP43Q8NDM7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
CFAP43Q8NDM7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CFAP43Q8NDM7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC30.02■■■□□ 2.4
CFAP43Q8NDM7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC30.02■■■□□ 2.4
CFAP43Q8NDM7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CFAP43Q8NDM7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC30.02■■■□□ 2.4
CFAP43Q8NDM7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CFAP43Q8NDM7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CFAP43Q8NDM7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CFAP43Q8NDM7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC30.02■■■□□ 2.4
CFAP43Q8NDM7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC30.02■■■□□ 2.4
CFAP43Q8NDM7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC30.02■■■□□ 2.4
CFAP43Q8NDM7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC30.02■■■□□ 2.4
CFAP43Q8NDM7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CFAP43Q8NDM7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CFAP43Q8NDM7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC30.02■■■□□ 2.4
CFAP43Q8NDM7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
CFAP43Q8NDM7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CFAP43Q8NDM7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
CFAP43Q8NDM7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CFAP43Q8NDM7 ANKRD18DP-204ENST00000455355 1975 ntBASIC30.01■■■□□ 2.4
CFAP43Q8NDM7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
CFAP43Q8NDM7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
CFAP43Q8NDM7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
CFAP43Q8NDM7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC30.01■■■□□ 2.4
CFAP43Q8NDM7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
CFAP43Q8NDM7 GCSHP2-201ENST00000560971 527 ntBASIC30.01■■■□□ 2.4
CFAP43Q8NDM7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.4
CFAP43Q8NDM7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC30.01■■■□□ 2.4
CFAP43Q8NDM7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
CFAP43Q8NDM7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
CFAP43Q8NDM7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
CFAP43Q8NDM7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms