Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC197Q8NCU1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC197Q8NCU1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC197Q8NCU1 MIR572-201ENST00000384983 95 ntBASIC19.05■□□□□ 0.64
CCDC197Q8NCU1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC197Q8NCU1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC197Q8NCU1 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC197Q8NCU1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC197Q8NCU1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC197Q8NCU1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCDC197Q8NCU1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC197Q8NCU1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC197Q8NCU1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC197Q8NCU1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC197Q8NCU1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC197Q8NCU1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC197Q8NCU1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC197Q8NCU1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC197Q8NCU1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC197Q8NCU1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC197Q8NCU1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CCDC197Q8NCU1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC197Q8NCU1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC197Q8NCU1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC197Q8NCU1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
CCDC197Q8NCU1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC197Q8NCU1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC197Q8NCU1 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.04■□□□□ 0.64
CCDC197Q8NCU1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC197Q8NCU1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CCDC197Q8NCU1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC197Q8NCU1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
CCDC197Q8NCU1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC197Q8NCU1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC197Q8NCU1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC197Q8NCU1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC197Q8NCU1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC197Q8NCU1 SIRPAP1-201ENST00000448467 1770 ntBASIC19.04■□□□□ 0.64
CCDC197Q8NCU1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 AL162741.1-201ENST00000565563 1558 ntBASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 AC073592.3-201ENST00000625118 1834 ntBASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC197Q8NCU1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 AC126763.1-201ENST00000552015 2118 ntBASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 DUX4L2-201ENST00000561772 1275 ntBASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 DUX4L6-201ENST00000626483 1275 ntBASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 DUX4L1-201ENST00000627662 1275 ntBASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 DUX4L8-201ENST00000629013 1275 ntBASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 DUX4L3-201ENST00000630187 1275 ntBASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 DUX4L7-201ENST00000630678 1275 ntBASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 DUX4L5-201ENST00000630834 1275 ntBASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms