Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PAF1Q8N7H5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PAF1Q8N7H5 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PAF1Q8N7H5 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.73■□□□□ 0.75
PAF1Q8N7H5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.73■□□□□ 0.75
PAF1Q8N7H5 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PAF1Q8N7H5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PAF1Q8N7H5 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PAF1Q8N7H5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.73■□□□□ 0.75
PAF1Q8N7H5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PAF1Q8N7H5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PAF1Q8N7H5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 RARRES2P10-201ENST00000564312 460 ntBASIC19.72■□□□□ 0.75
PAF1Q8N7H5 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.72■□□□□ 0.75
PAF1Q8N7H5 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 KRT18P16-201ENST00000510337 1294 ntBASIC19.71■□□□□ 0.75
PAF1Q8N7H5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.71■□□□□ 0.75
PAF1Q8N7H5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PAF1Q8N7H5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PAF1Q8N7H5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PAF1Q8N7H5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PAF1Q8N7H5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PAF1Q8N7H5 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PAF1Q8N7H5 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PAF1Q8N7H5 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.7■□□□□ 0.74
PAF1Q8N7H5 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PAF1Q8N7H5 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PAF1Q8N7H5 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PAF1Q8N7H5 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PAF1Q8N7H5 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
PAF1Q8N7H5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
PAF1Q8N7H5 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.7■□□□□ 0.74
PAF1Q8N7H5 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PAF1Q8N7H5 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.7■□□□□ 0.74
PAF1Q8N7H5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.7■□□□□ 0.74
PAF1Q8N7H5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PAF1Q8N7H5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PAF1Q8N7H5 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PAF1Q8N7H5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.7■□□□□ 0.74
PAF1Q8N7H5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PAF1Q8N7H5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.7■□□□□ 0.74
PAF1Q8N7H5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms