Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDH20Q8N6Y1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDH20Q8N6Y1 AP000525.1-201ENST00000608286 694 ntBASIC19.6■□□□□ 0.73
PCDH20Q8N6Y1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.6■□□□□ 0.73
PCDH20Q8N6Y1 AC011298.2-201ENST00000617989 482 ntBASIC19.6■□□□□ 0.73
PCDH20Q8N6Y1 AC130371.2-201ENST00000619443 611 ntBASIC19.6■□□□□ 0.73
PCDH20Q8N6Y1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PCDH20Q8N6Y1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH20Q8N6Y1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDH20Q8N6Y1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH20Q8N6Y1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 MMP23A-201ENST00000234610 1017 ntBASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH20Q8N6Y1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH20Q8N6Y1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH20Q8N6Y1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
PCDH20Q8N6Y1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDH20Q8N6Y1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH20Q8N6Y1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDH20Q8N6Y1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH20Q8N6Y1 AC087499.1-201ENST00000418141 1075 ntBASIC19.58■□□□□ 0.72
PCDH20Q8N6Y1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDH20Q8N6Y1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDH20Q8N6Y1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDH20Q8N6Y1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDH20Q8N6Y1 FITM1-202ENST00000559294 800 ntBASIC19.58■□□□□ 0.72
PCDH20Q8N6Y1 AP000692.2-201ENST00000608391 879 ntBASIC19.58■□□□□ 0.72
PCDH20Q8N6Y1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.58■□□□□ 0.72
PCDH20Q8N6Y1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDH20Q8N6Y1 LINC01465-201ENST00000408887 1940 ntBASIC19.58■□□□□ 0.72
PCDH20Q8N6Y1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
PCDH20Q8N6Y1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDH20Q8N6Y1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDH20Q8N6Y1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 AC125437.2-201ENST00000625180 2167 ntBASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 AL158211.5-201ENST00000623583 2518 ntBASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 MIR1238-201ENST00000408483 83 ntBASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH20Q8N6Y1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms