Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 AC008550.1-201ENST00000511500 884 ntBASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 AF186192.3-201ENST00000583427 947 ntBASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 AC066615.1-201ENST00000640911 628 ntBASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C11orf42Q8N5U0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 RPS2P55-201ENST00000397318 883 ntBASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 AC107956.1-201ENST00000494359 873 ntBASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 AC233702.5-201ENST00000584107 538 ntBASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C11orf42Q8N5U0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.96■□□□□ 0.14
C11orf42Q8N5U0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
C11orf42Q8N5U0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.96■□□□□ 0.14
C11orf42Q8N5U0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
C11orf42Q8N5U0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 HLA-A-209ENST00000638375 975 ntBASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 AP006294.2-201ENST00000641667 209 ntBASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C11orf42Q8N5U0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf42Q8N5U0 AL135905.2-201ENST00000584934 1404 ntBASIC15.94■□□□□ 0.14
C11orf42Q8N5U0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
C11orf42Q8N5U0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms