Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TTC39CQ8N584 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TTC39CQ8N584 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.42■□□□□ 0.86
TTC39CQ8N584 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TTC39CQ8N584 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TTC39CQ8N584 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
TTC39CQ8N584 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TTC39CQ8N584 TSPY23P-201ENST00000440136 739 ntBASIC20.42■□□□□ 0.86
TTC39CQ8N584 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
TTC39CQ8N584 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.42■□□□□ 0.86
TTC39CQ8N584 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.42■□□□□ 0.86
TTC39CQ8N584 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.42■□□□□ 0.86
TTC39CQ8N584 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TTC39CQ8N584 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TTC39CQ8N584 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.42■□□□□ 0.86
TTC39CQ8N584 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TTC39CQ8N584 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.42■□□□□ 0.86
TTC39CQ8N584 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TTC39CQ8N584 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TTC39CQ8N584 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TTC39CQ8N584 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TTC39CQ8N584 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TTC39CQ8N584 TEX21P-204ENST00000641479 1693 ntBASIC20.42■□□□□ 0.86
TTC39CQ8N584 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TTC39CQ8N584 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC39CQ8N584 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TTC39CQ8N584 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC39CQ8N584 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC39CQ8N584 AC116562.4-201ENST00000641316 2276 ntBASIC20.41■□□□□ 0.86
TTC39CQ8N584 UNC93B2-201ENST00000285383 730 ntBASIC20.41■□□□□ 0.86
TTC39CQ8N584 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC39CQ8N584 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TTC39CQ8N584 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.41■□□□□ 0.86
TTC39CQ8N584 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.41■□□□□ 0.86
TTC39CQ8N584 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TTC39CQ8N584 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.41■□□□□ 0.86
TTC39CQ8N584 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TTC39CQ8N584 AC096733.2-201ENST00000609937 1394 ntBASIC20.41■□□□□ 0.86
TTC39CQ8N584 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC39CQ8N584 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.41■□□□□ 0.86
TTC39CQ8N584 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TTC39CQ8N584 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC39CQ8N584 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TTC39CQ8N584 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC39CQ8N584 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC39CQ8N584 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TTC39CQ8N584 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
TTC39CQ8N584 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC39CQ8N584 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC39CQ8N584 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC39CQ8N584 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
TTC39CQ8N584 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TTC39CQ8N584 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TTC39CQ8N584 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TTC39CQ8N584 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
TTC39CQ8N584 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TTC39CQ8N584 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
TTC39CQ8N584 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TTC39CQ8N584 KRT8P11-201ENST00000409686 1436 ntBASIC20.4■□□□□ 0.86
TTC39CQ8N584 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.4■□□□□ 0.86
TTC39CQ8N584 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TTC39CQ8N584 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.4■□□□□ 0.86
TTC39CQ8N584 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.4■□□□□ 0.86
TTC39CQ8N584 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.4■□□□□ 0.86
TTC39CQ8N584 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.4■□□□□ 0.86
TTC39CQ8N584 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.4■□□□□ 0.86
TTC39CQ8N584 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TTC39CQ8N584 CKBP1-201ENST00000565489 1086 ntBASIC20.4■□□□□ 0.86
TTC39CQ8N584 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TTC39CQ8N584 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.4■□□□□ 0.86
TTC39CQ8N584 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.4■□□□□ 0.86
TTC39CQ8N584 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.4■□□□□ 0.86
TTC39CQ8N584 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
TTC39CQ8N584 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TTC39CQ8N584 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TTC39CQ8N584 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
TTC39CQ8N584 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
TTC39CQ8N584 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TTC39CQ8N584 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
TTC39CQ8N584 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TTC39CQ8N584 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
TTC39CQ8N584 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TTC39CQ8N584 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TTC39CQ8N584 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.39■□□□□ 0.85
TTC39CQ8N584 AC007952.6-201ENST00000573168 2673 ntBASIC20.39■□□□□ 0.85
TTC39CQ8N584 AC003957.1-201ENST00000625108 2673 ntBASIC20.39■□□□□ 0.85
TTC39CQ8N584 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TTC39CQ8N584 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
TTC39CQ8N584 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.39■□□□□ 0.85
TTC39CQ8N584 AC008040.2-201ENST00000461049 708 ntBASIC20.39■□□□□ 0.85
TTC39CQ8N584 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TTC39CQ8N584 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TTC39CQ8N584 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TTC39CQ8N584 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.39■□□□□ 0.85
TTC39CQ8N584 AP005242.2-201ENST00000580065 1175 ntBASIC20.39■□□□□ 0.85
TTC39CQ8N584 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TTC39CQ8N584 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.39■□□□□ 0.85
TTC39CQ8N584 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TTC39CQ8N584 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TTC39CQ8N584 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms