Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 AL023803.3-201ENST00000615559 522 ntBASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ARHGEF39Q8N4T4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 NAPSB-206ENST00000562112 1266 ntBASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 AC133561.5-201ENST00000635547 218 ntBASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ARHGEF39Q8N4T4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ARHGEF39Q8N4T4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
ARHGEF39Q8N4T4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ARHGEF39Q8N4T4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ARHGEF39Q8N4T4 INGX-201ENST00000359239 846 ntBASIC18.12■□□□□ 0.49
ARHGEF39Q8N4T4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ARHGEF39Q8N4T4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
ARHGEF39Q8N4T4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.12■□□□□ 0.49
ARHGEF39Q8N4T4 ECEL1P3-201ENST00000427961 737 ntBASIC18.12■□□□□ 0.49
ARHGEF39Q8N4T4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.12■□□□□ 0.49
ARHGEF39Q8N4T4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.12■□□□□ 0.49
ARHGEF39Q8N4T4 EGLN1P1-201ENST00000531623 762 ntBASIC18.12■□□□□ 0.49
ARHGEF39Q8N4T4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.12■□□□□ 0.49
ARHGEF39Q8N4T4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.12■□□□□ 0.49
ARHGEF39Q8N4T4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ARHGEF39Q8N4T4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ARHGEF39Q8N4T4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ARHGEF39Q8N4T4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.12■□□□□ 0.49
ARHGEF39Q8N4T4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ARHGEF39Q8N4T4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.12■□□□□ 0.49
ARHGEF39Q8N4T4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 CA15P1-201ENST00000481698 905 ntBASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 LINC01023-201ENST00000606054 436 ntBASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ARHGEF39Q8N4T4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ARHGEF39Q8N4T4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.1■□□□□ 0.49
ARHGEF39Q8N4T4 AL032819.2-201ENST00000624543 2162 ntBASIC18.1■□□□□ 0.49
ARHGEF39Q8N4T4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ARHGEF39Q8N4T4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms