Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.78■□□□□ 0.92
VPS52Q8N1B4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS52Q8N1B4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
VPS52Q8N1B4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VPS52Q8N1B4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS52Q8N1B4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
VPS52Q8N1B4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
VPS52Q8N1B4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.78■□□□□ 0.92
VPS52Q8N1B4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.78■□□□□ 0.92
VPS52Q8N1B4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.78■□□□□ 0.92
VPS52Q8N1B4 CCR12P-201ENST00000446203 998 ntBASIC20.78■□□□□ 0.92
VPS52Q8N1B4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS52Q8N1B4 AC091390.4-202ENST00000476426 537 ntBASIC20.78■□□□□ 0.92
VPS52Q8N1B4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.78■□□□□ 0.92
VPS52Q8N1B4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
VPS52Q8N1B4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS52Q8N1B4 AC112907.3-201ENST00000577781 2400 ntBASIC20.78■□□□□ 0.92
VPS52Q8N1B4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VPS52Q8N1B4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
VPS52Q8N1B4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS52Q8N1B4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VPS52Q8N1B4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 AC022616.7-201ENST00000525383 220 ntBASIC20.77■□□□□ 0.92
VPS52Q8N1B4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS52Q8N1B4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
VPS52Q8N1B4 KRT8P8-201ENST00000434750 1448 ntBASIC20.77■□□□□ 0.91
VPS52Q8N1B4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
VPS52Q8N1B4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
VPS52Q8N1B4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
VPS52Q8N1B4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
VPS52Q8N1B4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VPS52Q8N1B4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
VPS52Q8N1B4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
VPS52Q8N1B4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.76■□□□□ 0.91
VPS52Q8N1B4 AC117947.1-201ENST00000427448 529 ntBASIC20.76■□□□□ 0.91
VPS52Q8N1B4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.76■□□□□ 0.91
VPS52Q8N1B4 Z85996.1-201ENST00000494644 937 ntBASIC20.76■□□□□ 0.91
VPS52Q8N1B4 AC063952.2-201ENST00000498792 1227 ntBASIC20.76■□□□□ 0.91
VPS52Q8N1B4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VPS52Q8N1B4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.76■□□□□ 0.91
VPS52Q8N1B4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.76■□□□□ 0.91
VPS52Q8N1B4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
VPS52Q8N1B4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
VPS52Q8N1B4 AIRN-201ENST00000601203 4374 ntBASIC20.76■□□□□ 0.91
VPS52Q8N1B4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.76■□□□□ 0.91
VPS52Q8N1B4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VPS52Q8N1B4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
VPS52Q8N1B4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
VPS52Q8N1B4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.76■□□□□ 0.91
VPS52Q8N1B4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VPS52Q8N1B4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.76■□□□□ 0.91
VPS52Q8N1B4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VPS52Q8N1B4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VPS52Q8N1B4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VPS52Q8N1B4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.75■□□□□ 0.91
VPS52Q8N1B4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.75■□□□□ 0.91
VPS52Q8N1B4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VPS52Q8N1B4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VPS52Q8N1B4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.75■□□□□ 0.91
VPS52Q8N1B4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.75■□□□□ 0.91
VPS52Q8N1B4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.75■□□□□ 0.91
VPS52Q8N1B4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
VPS52Q8N1B4 SLC25A1P2-201ENST00000430693 912 ntBASIC20.75■□□□□ 0.91
VPS52Q8N1B4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.75■□□□□ 0.91
VPS52Q8N1B4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.75■□□□□ 0.91
VPS52Q8N1B4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.75■□□□□ 0.91
VPS52Q8N1B4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.75■□□□□ 0.91
VPS52Q8N1B4 LINC01238-205ENST00000567549 1107 ntBASIC20.75■□□□□ 0.91
VPS52Q8N1B4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.75■□□□□ 0.91
VPS52Q8N1B4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.75■□□□□ 0.91
VPS52Q8N1B4 BX119927.1-201ENST00000636596 1552 ntBASIC20.75■□□□□ 0.91
VPS52Q8N1B4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
VPS52Q8N1B4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VPS52Q8N1B4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms