Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC28.49■■■□□ 2.15
ABCA6Q8N139 ANKRD18DP-204ENST00000455355 1975 ntBASIC28.49■■■□□ 2.15
ABCA6Q8N139 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC28.49■■■□□ 2.15
ABCA6Q8N139 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
ABCA6Q8N139 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
ABCA6Q8N139 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
ABCA6Q8N139 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC28.49■■■□□ 2.15
ABCA6Q8N139 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
ABCA6Q8N139 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC28.49■■■□□ 2.15
ABCA6Q8N139 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
ABCA6Q8N139 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
ABCA6Q8N139 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
ABCA6Q8N139 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
ABCA6Q8N139 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
ABCA6Q8N139 TSPY22P-201ENST00000427496 604 ntBASIC28.48■■■□□ 2.15
ABCA6Q8N139 KRT18P31-201ENST00000506277 1292 ntBASIC28.48■■■□□ 2.15
ABCA6Q8N139 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC28.48■■■□□ 2.15
ABCA6Q8N139 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
ABCA6Q8N139 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC28.48■■■□□ 2.15
ABCA6Q8N139 AP005212.1-201ENST00000581547 1997 ntBASIC28.48■■■□□ 2.15
ABCA6Q8N139 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
ABCA6Q8N139 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC28.48■■■□□ 2.15
ABCA6Q8N139 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
ABCA6Q8N139 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC28.47■■■□□ 2.15
ABCA6Q8N139 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
ABCA6Q8N139 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC28.47■■■□□ 2.15
ABCA6Q8N139 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
ABCA6Q8N139 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC28.47■■■□□ 2.15
ABCA6Q8N139 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC28.47■■■□□ 2.15
ABCA6Q8N139 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
ABCA6Q8N139 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
ABCA6Q8N139 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
ABCA6Q8N139 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC28.46■■■□□ 2.15
ABCA6Q8N139 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC28.46■■■□□ 2.15
ABCA6Q8N139 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC28.46■■■□□ 2.15
ABCA6Q8N139 FOSL1P1-201ENST00000511041 816 ntBASIC28.46■■■□□ 2.15
ABCA6Q8N139 AP000867.3-201ENST00000524675 377 ntBASIC28.46■■■□□ 2.15
ABCA6Q8N139 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC28.46■■■□□ 2.15
ABCA6Q8N139 IL11-204ENST00000590625 1028 ntTSL 2 BASIC28.46■■■□□ 2.15
ABCA6Q8N139 AC138894.3-201ENST00000603787 634 ntBASIC28.46■■■□□ 2.15
ABCA6Q8N139 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC28.46■■■□□ 2.15
ABCA6Q8N139 AL391807.1-203ENST00000604392 2365 ntBASIC28.46■■■□□ 2.15
ABCA6Q8N139 AC026310.3-201ENST00000625186 2373 ntBASIC28.46■■■□□ 2.15
ABCA6Q8N139 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
ABCA6Q8N139 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
ABCA6Q8N139 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
ABCA6Q8N139 AC104417.2-201ENST00000562989 1793 ntBASIC28.45■■■□□ 2.14
ABCA6Q8N139 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
ABCA6Q8N139 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
ABCA6Q8N139 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
ABCA6Q8N139 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC28.45■■■□□ 2.14
ABCA6Q8N139 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
ABCA6Q8N139 KRT16P4-201ENST00000453883 522 ntBASIC28.45■■■□□ 2.14
ABCA6Q8N139 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC28.45■■■□□ 2.14
ABCA6Q8N139 MIR3180-5-201ENST00000583743 153 ntBASIC28.45■■■□□ 2.14
ABCA6Q8N139 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
ABCA6Q8N139 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC28.45■■■□□ 2.14
ABCA6Q8N139 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
ABCA6Q8N139 UBC-206ENST00000538617 1303 ntTSL 5 BASIC28.45■■■□□ 2.14
ABCA6Q8N139 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC28.45■■■□□ 2.14
ABCA6Q8N139 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
ABCA6Q8N139 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC28.45■■■□□ 2.14
ABCA6Q8N139 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
ABCA6Q8N139 LINC00565-201ENST00000562710 2331 ntBASIC28.45■■■□□ 2.14
ABCA6Q8N139 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
ABCA6Q8N139 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
ABCA6Q8N139 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC28.44■■■□□ 2.14
ABCA6Q8N139 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
ABCA6Q8N139 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC28.44■■■□□ 2.14
ABCA6Q8N139 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
ABCA6Q8N139 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
ABCA6Q8N139 MIR662-201ENST00000384847 95 ntBASIC28.44■■■□□ 2.14
ABCA6Q8N139 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC28.44■■■□□ 2.14
ABCA6Q8N139 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC28.44■■■□□ 2.14
ABCA6Q8N139 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC28.44■■■□□ 2.14
ABCA6Q8N139 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
ABCA6Q8N139 HLA-A-201ENST00000376802 1334 ntBASIC28.44■■■□□ 2.14
ABCA6Q8N139 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
ABCA6Q8N139 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC28.44■■■□□ 2.14
ABCA6Q8N139 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC28.44■■■□□ 2.14
ABCA6Q8N139 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
ABCA6Q8N139 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC28.43■■■□□ 2.14
ABCA6Q8N139 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
ABCA6Q8N139 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
ABCA6Q8N139 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC28.43■■■□□ 2.14
ABCA6Q8N139 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC28.43■■■□□ 2.14
ABCA6Q8N139 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC28.43■■■□□ 2.14
ABCA6Q8N139 TP73-AS1-207ENST00000624167 988 ntBASIC28.43■■■□□ 2.14
ABCA6Q8N139 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC28.43■■■□□ 2.14
ABCA6Q8N139 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
ABCA6Q8N139 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC28.43■■■□□ 2.14
ABCA6Q8N139 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
ABCA6Q8N139 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
ABCA6Q8N139 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
ABCA6Q8N139 AC009237.14-201ENST00000609975 1594 ntBASIC28.43■■■□□ 2.14
ABCA6Q8N139 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC28.43■■■□□ 2.14
ABCA6Q8N139 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC28.43■■■□□ 2.14
ABCA6Q8N139 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC28.43■■■□□ 2.14
ABCA6Q8N139 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC28.43■■■□□ 2.14
ABCA6Q8N139 MIR3917-201ENST00000580971 93 ntBASIC28.43■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms