Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CCDC146Q8IYE0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC146Q8IYE0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC25.44■■□□□ 1.66
CCDC146Q8IYE0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC146Q8IYE0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC25.44■■□□□ 1.66
CCDC146Q8IYE0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC25.44■■□□□ 1.66
CCDC146Q8IYE0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC146Q8IYE0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC146Q8IYE0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC146Q8IYE0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC146Q8IYE0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC146Q8IYE0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
CCDC146Q8IYE0 AC004951.3-201ENST00000418645 1148 ntBASIC25.44■■□□□ 1.66
CCDC146Q8IYE0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC146Q8IYE0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC25.44■■□□□ 1.66
CCDC146Q8IYE0 AC026271.3-201ENST00000571884 352 ntBASIC25.44■■□□□ 1.66
CCDC146Q8IYE0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC25.44■■□□□ 1.66
CCDC146Q8IYE0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC146Q8IYE0 AC130371.2-201ENST00000619443 611 ntBASIC25.44■■□□□ 1.66
CCDC146Q8IYE0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC25.44■■□□□ 1.66
CCDC146Q8IYE0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC146Q8IYE0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC146Q8IYE0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC146Q8IYE0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC25.44■■□□□ 1.66
CCDC146Q8IYE0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC25.44■■□□□ 1.66
CCDC146Q8IYE0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC146Q8IYE0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC25.43■■□□□ 1.66
CCDC146Q8IYE0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
CCDC146Q8IYE0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC25.43■■□□□ 1.66
CCDC146Q8IYE0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC25.43■■□□□ 1.66
CCDC146Q8IYE0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC146Q8IYE0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC25.43■■□□□ 1.66
CCDC146Q8IYE0 TSPY23P-201ENST00000440136 739 ntBASIC25.43■■□□□ 1.66
CCDC146Q8IYE0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC25.43■■□□□ 1.66
CCDC146Q8IYE0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC25.43■■□□□ 1.66
CCDC146Q8IYE0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC25.43■■□□□ 1.66
CCDC146Q8IYE0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC25.43■■□□□ 1.66
CCDC146Q8IYE0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC146Q8IYE0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC146Q8IYE0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC146Q8IYE0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC146Q8IYE0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC146Q8IYE0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC146Q8IYE0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC146Q8IYE0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC25.42■■□□□ 1.66
CCDC146Q8IYE0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC25.42■■□□□ 1.66
CCDC146Q8IYE0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC25.42■■□□□ 1.66
CCDC146Q8IYE0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC146Q8IYE0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC146Q8IYE0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC146Q8IYE0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC25.42■■□□□ 1.66
CCDC146Q8IYE0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC25.42■■□□□ 1.66
CCDC146Q8IYE0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC25.42■■□□□ 1.66
CCDC146Q8IYE0 MIR4785-201ENST00000585005 73 ntBASIC25.42■■□□□ 1.66
CCDC146Q8IYE0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC25.42■■□□□ 1.66
CCDC146Q8IYE0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC25.42■■□□□ 1.66
CCDC146Q8IYE0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC146Q8IYE0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC146Q8IYE0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC146Q8IYE0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC146Q8IYE0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC25.42■■□□□ 1.66
CCDC146Q8IYE0 AC141586.3-201ENST00000562166 1838 ntBASIC25.42■■□□□ 1.66
CCDC146Q8IYE0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC146Q8IYE0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC146Q8IYE0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC146Q8IYE0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC146Q8IYE0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC25.41■■□□□ 1.66
CCDC146Q8IYE0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC146Q8IYE0 KRT8P11-201ENST00000409686 1436 ntBASIC25.41■■□□□ 1.66
CCDC146Q8IYE0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
CCDC146Q8IYE0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC25.41■■□□□ 1.66
CCDC146Q8IYE0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC25.41■■□□□ 1.66
CCDC146Q8IYE0 RBM17P1-201ENST00000453646 1190 ntBASIC25.41■■□□□ 1.66
CCDC146Q8IYE0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC25.41■■□□□ 1.66
CCDC146Q8IYE0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC25.41■■□□□ 1.66
CCDC146Q8IYE0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC25.41■■□□□ 1.66
CCDC146Q8IYE0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC25.41■■□□□ 1.66
CCDC146Q8IYE0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC146Q8IYE0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC146Q8IYE0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC146Q8IYE0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC146Q8IYE0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC146Q8IYE0 AC079598.2-202ENST00000546624 1451 ntBASIC25.4■■□□□ 1.66
CCDC146Q8IYE0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC146Q8IYE0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC146Q8IYE0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC25.4■■□□□ 1.66
CCDC146Q8IYE0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC146Q8IYE0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC25.4■■□□□ 1.66
CCDC146Q8IYE0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC146Q8IYE0 AL390955.1-201ENST00000428694 934 ntBASIC25.4■■□□□ 1.66
CCDC146Q8IYE0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC146Q8IYE0 AP000525.1-201ENST00000608286 694 ntBASIC25.4■■□□□ 1.66
CCDC146Q8IYE0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC146Q8IYE0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC146Q8IYE0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC146Q8IYE0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC25.4■■□□□ 1.66
CCDC146Q8IYE0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC146Q8IYE0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC25.4■■□□□ 1.66
CCDC146Q8IYE0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC146Q8IYE0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms