Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 CRYGFP-201ENST00000418459 633 ntBASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 PCDHAC2-203ENST00000615316 3011 ntBASIC18.82■□□□□ 0.6
TRIM48Q8IWZ4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM48Q8IWZ4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM48Q8IWZ4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM48Q8IWZ4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM48Q8IWZ4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM48Q8IWZ4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRIM48Q8IWZ4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.81■□□□□ 0.6
TRIM48Q8IWZ4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM48Q8IWZ4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM48Q8IWZ4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.81■□□□□ 0.6
TRIM48Q8IWZ4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM48Q8IWZ4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM48Q8IWZ4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM48Q8IWZ4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRIM48Q8IWZ4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM48Q8IWZ4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM48Q8IWZ4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM48Q8IWZ4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM48Q8IWZ4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM48Q8IWZ4 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.81■□□□□ 0.6
TRIM48Q8IWZ4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM48Q8IWZ4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM48Q8IWZ4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 Z85996.1-201ENST00000494644 937 ntBASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 C2orf69P3-201ENST00000565542 1120 ntBASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 AC130371.2-201ENST00000619443 611 ntBASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM48Q8IWZ4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM48Q8IWZ4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.79■□□□□ 0.6
TRIM48Q8IWZ4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM48Q8IWZ4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.79■□□□□ 0.6
TRIM48Q8IWZ4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM48Q8IWZ4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM48Q8IWZ4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TRIM48Q8IWZ4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TRIM48Q8IWZ4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRIM48Q8IWZ4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM48Q8IWZ4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM48Q8IWZ4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM48Q8IWZ4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.79■□□□□ 0.6
TRIM48Q8IWZ4 AP000692.2-201ENST00000608391 879 ntBASIC18.79■□□□□ 0.6
TRIM48Q8IWZ4 KRT8P9-201ENST00000558927 1449 ntBASIC18.79■□□□□ 0.6
TRIM48Q8IWZ4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM48Q8IWZ4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM48Q8IWZ4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM48Q8IWZ4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM48Q8IWZ4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM48Q8IWZ4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms