Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RP1L1Q8IWN7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 AP000593.1-201ENST00000393668 712 ntBASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 STARP1-201ENST00000397973 869 ntBASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 AL353719.1-201ENST00000566847 864 ntBASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 AC007375.3-201ENST00000600936 2314 ntBASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 KRT17P6-201ENST00000453795 1220 ntBASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RP1L1Q8IWN7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 KRT16P6-202ENST00000425692 1426 ntBASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 AC006538.3-201ENST00000612495 578 ntBASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 AC009078.2-202ENST00000463353 338 ntBASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
RP1L1Q8IWN7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
RP1L1Q8IWN7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RP1L1Q8IWN7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RP1L1Q8IWN7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RP1L1Q8IWN7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RP1L1Q8IWN7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RP1L1Q8IWN7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RP1L1Q8IWN7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RP1L1Q8IWN7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RP1L1Q8IWN7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RP1L1Q8IWN7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RP1L1Q8IWN7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RP1L1Q8IWN7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.34■□□□□ 0.37
RP1L1Q8IWN7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RP1L1Q8IWN7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.34■□□□□ 0.37
RP1L1Q8IWN7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.34■□□□□ 0.37
RP1L1Q8IWN7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.34■□□□□ 0.37
RP1L1Q8IWN7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RP1L1Q8IWN7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.34■□□□□ 0.37
RP1L1Q8IWN7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RP1L1Q8IWN7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
RP1L1Q8IWN7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RP1L1Q8IWN7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.34■□□□□ 0.37
RP1L1Q8IWN7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RP1L1Q8IWN7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.34■□□□□ 0.37
RP1L1Q8IWN7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.33■□□□□ 0.37
RP1L1Q8IWN7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.33■□□□□ 0.37
RP1L1Q8IWN7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.37
RP1L1Q8IWN7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.33■□□□□ 0.37
RP1L1Q8IWN7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.33■□□□□ 0.37
RP1L1Q8IWN7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
RP1L1Q8IWN7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
RP1L1Q8IWN7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RP1L1Q8IWN7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RP1L1Q8IWN7 HBZP1-201ENST00000354915 429 ntBASIC17.33■□□□□ 0.36
RP1L1Q8IWN7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RP1L1Q8IWN7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RP1L1Q8IWN7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
RP1L1Q8IWN7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
RP1L1Q8IWN7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.33■□□□□ 0.36
RP1L1Q8IWN7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RP1L1Q8IWN7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RP1L1Q8IWN7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RP1L1Q8IWN7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms